Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SRMQQVLLGEQPLDEPLTIKGPYSVYLRDQVVTYFTLLGKIRPEHKDDKDLDDVSNIEKPPGIPGFIGKTTLPAVKCTVHEQDDGTIVAVCATGTSSRDSLLSWIRLLEKYGNPVLSDIPVIFTL |
1 | 2y7bA | 0.07 | 0.04 | 0.58 | 0.77 | DisCoVER | | --------------SSVEERGFLTIFEDGAWHRRWCVLSGRN--TFELITVRETL-V--------SQCRDTLCVTKNWLSADTKEERDLWMQ--------------------------KLNQVL- |
2 | 4xe2A | 0.11 | 0.09 | 0.80 | 0.83 | DEthreader | | FRELISNASDALDELEIKIIPDKTA-------KTLTLIDSGGMTDKNGRTFM---DIS-----M-I---GQF-GVGFYAVVHVDTKIVLMQLDY-LDETKIKNLVKKHSE--FIQ--YPISLLTI |
3 | 4n20A1 | 0.06 | 0.06 | 0.90 | 0.57 | CEthreader | | ----RERTVRLQYGSRVEAVYVLGT--------YLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTA |
4 | 5fjwA1 | 0.10 | 0.10 | 0.92 | 0.77 | EigenThreader | | DV-------PENNGILISIKEVINAEFSRDGSSEGVLELRINDHDLSHSSFQFKTHPNIDKQSFLSTKLISLRDKSKAFPANDQSLGVLRWAPAEKSFTGAIQSVVA---NDHDQELPYDVITSL |
5 | 4b6hA | 0.12 | 0.09 | 0.70 | 0.25 | HHpred | | -----AALKQHDPYEKTDIEGTLFVYRRSASHGFTIVNR--NMHNVEPVNKD----LEFQLHEPFL------------LYRNASLSIYSIWFYDKNDCHRIAKLMADVVEE-------------- |
6 | 6ppjA | 0.19 | 0.17 | 0.88 | 0.48 | MRFsearch | | -PQAARLVRALAATGLTVIAGDPVVLLRDDTHPAITLTQS-------YRCAPEIASAITGLGQR-------LPTRHWTGNPQREGTVTVRLAATHAEGTMIADALRRAHLVDGIPWSQMAVIVRS |
7 | 1uprA | 0.18 | 0.14 | 0.76 | 0.55 | FFAS-3D | | ---------RRDPNLPVHIRG----WLRLWKRRWFVLSGHCLKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLA-----ADTLEDLRGWLRALGRASR------------ |
8 | 1plsA | 0.10 | 0.09 | 0.85 | 0.85 | SPARKS-K | | ------MEPKRIREGYLVKKGSMWVVLLEDGIEFYK-----KKSDNSPKGMIPLKGSTLTSPCQDFGKRMF-----VFKITTTKQQDHFFQA---AFLEERDAWVRDINKAIKCIEGLEHHHHHH |
9 | 3ot2A | 0.09 | 0.06 | 0.72 | 0.64 | CNFpred | | SECVSVINSVVKPQRIARAFLELRCTFGD-VPDISVFIWSRIPREENGEIANIFL----------------------------IAPDWTIEILSPDSQTKVTKNILHCLKH------GTQMGWLI |
10 | 3etdA | 0.08 | 0.06 | 0.81 | 0.83 | DEthreader | | ----A-VDV-PFGDVP-TGVFGIFINEASYMIMIYLAGVSYFEKVSYGRTFERDSNHLLMQIPIVPT-FQRISGADIHSGLA---TMRSAIMAGLDLRTAAYVNAIEKVF-R-V----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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