>PF14776 (523 residues) NDSARMSLFPNLDYKGLYNSLIPLIETAPLIQNGINAFGLAVLQCLGCLLPFLETETIDY LPYLTASCIAVFPSTLHQEIVNTLCFYVLPFTVTRYTEREYEITQSVSAVIMMIFNHSSN PAHHCQLLECLMTLKQSILKDLLCVIAYGTSTARSSAAKLLFYYWPAFDPNLFDRKGLIC KLGGDPAPFVCQRDMCSNAGNAEAAKVCYDHCIAITFANDVPPPLYLCIECANEIHREHP NQVFHDILHPVQQVSMVCENKNCRSNDKSAVSVCFSIECASYNGYRPIRYCQQCHNNRHN NRRGGDHIFHKSVPPTWSLDEEMHTYMIEAIISLLKESKLQTSEPKSQSAGPASTSDNKP LSLPPPTDNISSEERQLLGRYGVWLLVGRCTPNDSTSVEVMGRLLSMLFHWFHMTAYSFD GQESILEKLKVENVCSWLKDLCKTHYDLFVSCLLPHPPDYARIGGHWDSLASRTTHLKDG LNRLFHLIPYEVINQEVWDFVMPHWMEAIVNDVPEKELQELKI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | NDSARMSLFPNLDYKGLYNSLIPLIETAPLIQNGINAFGLAVLQCLGCLLPFLETETIDYLPYLTASCIAVFPSTLHQEIVNTLCFYVLPFTVTRYTEREYEITQSVSAVIMMIFNHSSNPAHHCQLLECLMTLKQSILKDLLCVIAYGTSTARSSAAKLLFYYWPAFDPNLFDRKGLICKLGGDPAPFVCQRDMCSNAGNAEAAKVCYDHCIAITFANDVPPPLYLCIECANEIHREHPNQVFHDILHPVQQVSMVCENKNCRSNDKSAVSVCFSIECASYNGYRPIRYCQQCHNNRHNNRRGGDHIFHKSVPPTWSLDEEMHTYMIEAIISLLKESKLQTSEPKSQSAGPASTSDNKPLSLPPPTDNISSEERQLLGRYGVWLLVGRCTPNDSTSVEVMGRLLSMLFHWFHMTAYSFDGQESILEKLKVENVCSWLKDLCKTHYDLFVSCLLPHPPDYARIGGHWDSLASRTTHLKDGLNRLFHLIPYEVINQEVWDFVMPHWMEAIVNDVPEKELQELKI | |||||||||||||||||||
1 | 4rxhB | 0.07 | 0.05 | 0.70 | 0.70 | DisCoVER | ----IQATTKFR-------------KLLSKPP--IEEVIGVVG-RFVEFLRSPHTLVQFEAAWALTNIAS-GSATQTQVVIEAAVPIFVELLGS----PEPDVREQAVWALGNIA-GD--SPCRDYVLCGALRP----LLTL--LGDSRKLSMLRNATWTLSNFCRGK---TPQ---PTIAPALPVLAL-VY---SLDDEVLIDACWAISYLSDGSNDKIQAVIPRRLV-LL--MH---ASTSVQTPAL--------------------RSVGNIVT-GDDVQTQVIC-GALPCLLSLLSSGIRKEACWTISNITAGNSAQ--IQSVANIIPPLIHLL--------------------------------SHADLKTRK-EACWAISNATSGGPQI-RYLVQGCIKPLCDLLAC-------------KIIQ-VALDGLENILKVGELDKNRYAFIEECGGMEKIHDCQTNANEEIYM-----------------------KAYNIIEKYF------------- | |||||||||||||
2 | 5jouA | 0.05 | 0.03 | 0.59 | 0.67 | DEthreader | GGGGQVFESEAFYG--LG----HQ---A---------DEFNYKKNEKVSVPFLDSCRGNPDYFKFILYYKVPVVPERWR-A-NPNS-Y---K------FAAHL-----------IEWQPDGGQSYCG------EMT-------S--M------FW-SRE-------------------------LDWNWENAWGSHEFDKARFP-----------------MISVWPKFY-TTEHFKEFDENGWMY--KDWYHYGFYDAYDPDARK-F--W-QMYYYPGIDAWWMDAS---------GQRGVDNNKVFLTRSGFAGL-QRY--STATWSGPYWTMDIGGFCVENRYAGENAD--------------KEWRELNTRWYQFGAFVPLYIYAGMTFDDYTRVMDFTVIGDQFMMVSPVYRYGDRSRIEAPYERI-PLYVRAGAIIYGEFTLY-------------------------------------------------------------------------- | |||||||||||||
3 | 2x1gF | 0.07 | 0.07 | 1.00 | 0.77 | CEthreader | VKRVVLRAEIAKRVQLVIHTVERYLKLQMVWDAEAYSNMNRAVKCVGTWIKNIGIEGCVTITAVLLEVVHKCENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTENDNEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSILVHRIVQEIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNNSSMSAQATLGLKELCRDCQLQLKPYADPLLNACHASLNTGKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQATPAARIRTIFRLNMISTLFSSLNTPVLLVMQRTMPIMWVEEIDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFQCCAKTAIVMFFKPLMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQVLEDKTLAYDRLVFYAQRGMTLPESGAIRNSIQFLTHFVMQSRNHAHVTEVVLATGEQTLYTAMMCVGYLTPRVDKFADILLAMNRKYAAEMAVWMKSLMST | |||||||||||||
4 | 1b3uA | 0.05 | 0.05 | 0.87 | 0.95 | EigenThreader | LAEQLGTFTTVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEH---SPSDLEAHFVPLVKRLAGGDW---FTSRTSACGLFSVCY-----PRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSKFTELQKAVGPEITKTD--LVPAFQNLMKDCEAEVRAAASHKVKEFCENSDANQHVKSALASVLFLAQLKDECPEVRLNIISNL---DCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR-----LAIIEYMPLLAGQLGKLNSLCMAWLVDHV----------YAIREAATSNLKKLVEKFGKEWAHATIIPKVLAM------SGDPNYLHRMTTLFCINVLSEVC----------GQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLT---------QDQDVDVKYFAQEALTVL----SLA-------- | |||||||||||||
5 | 2pffB | 0.15 | 0.10 | 0.68 | 0.61 | HHpred | ---LCLTEFENCDIHALAAKLLQENDT--TLVKTKELIKNYITARIMAKRPFDKRDLYQTYHVLVGDLIKFSAETLSELIRTTLDA-EKVFTILESNPDKDY-LLSIPISCPLVIQLAHKLLFTPGELRSYLKGATGHSQGLVTAVAIAEFVSVRKAITVLFFIYPNTSLPILNNEGVPSPMLSISNLTQEQVQDYVNKTNLPAGKQVEISLVGAKNLVVSGPPQSLYGLNLTLRKAKAPS-GLDQSRIPFSERKLKFSNRF------LPVASPFH-----SHLLVPASDLINKDLVKNNVSAKDIQIPVYDTFDGSDLSGSISERIVDCIIRLPVKWETTTQFKLDFGPGGASGLGVLRVIVAG-TLDINPDD----------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6h02A | 0.14 | 0.11 | 0.76 | 0.48 | MRFsearch | --MNLLDSLTVHAKMSLIHSIATRVIKLAHA-KSSVALAPALVETYSRLLVYMEIESLGFISQLLPTVFKSHAWGILHTLLEMFSYRMLHTLAAVAQTNQNQLHLCVESTALRLITALGSEELNRALILTLARATGTWCKDILQTIMSFSRFNLKKNVEEEYRKWKSM---------------------------------------SNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLEGGQQLNKCIEI--------NEAQVCYFIKHMNYHKKYPEKLYFEGLAEQVDPPV---QIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELL-----------------------------PVSKSLETLLDHLGGLYKFH----------DRPVTYLYNTLHYYEMHLR---DRAFLKRKLVHAYYCRLIGRLVDTVGNALLNVVLK---------------RENITAWMNAIGLIITAL-----PEPYWIVLHDRIVSVISSP----------- | |||||||||||||
7 | 6wg3E | 0.12 | 0.11 | 0.91 | 0.89 | FFAS-3D | ----------AVYIEDVIERVIQYTKLYPQYDRVIVMLYNKVCDIVSSLSELLTDTTILQVSSMGITPFFVENSELQLCAIKLVTAVFSRY-----EKHRQLILEEITALVLQLIQCVVHQNFLSIFLKKCGSKQGEFVQDLLSTVNKAAELLLSLLGRLLVHQFSNKSTE-MALRVASLDYLGTVAARLRKDAVTSKMDEIQQLQKALLDYLDENTETDPSLVFFYIAQWFRDTTLETEKKEIETTGQIMHRAENRKKFLRSDTVDYDDACLIYLTQILRVLGENAIAVRTKAMKAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQ-------------YYDMLIERILDTGISVRKRVIKILRDICIE---QPTFPKITEMCVKMIRETFQWFDVVAACRDTGYDWFEQLLQNLLKSEVKKACTQLVDNLVEHIL--------------KYEENSGRLVACITTLFTMQPYLTTDFMVICNVAKILELVVPEHPSETFLATIE- | |||||||||||||
8 | 6xteA | 0.10 | 0.09 | 0.93 | 0.83 | SPARKS-K | HNVALFKHFADLLLQAVNDSCDSVLKSLVEIDTVPKYLRPHLEATLQLSLKLCGNNMQRQLALEVIVTLSETAAAMLTNIVAQTIPQMLAMMVD-LEDFDSNAVAGESALDRMACGLNPDWKYRHAGLMALSAILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFAPGFQKKQTMEINFTEDCPKHSIMVLKLQEKGTKLVEQVVTSIASVADTAEEKFVPMPSLKHIVENAVQKELRLLRGKTIECISLIGLAVG-----------------KEKFMQDASDVMQLLLKTQTDF-----PQISYMISAWARMCKIGKEFQQYLPVVMGPLMKTASIKPEVALLDTQDMENMSDDEFVNLGDQQSFGIKTAGLEEKSTACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKF------YFHDGVRVAAAESMPLLLECARVRYLTQMWHFMCDALIKAIG-------TEPDSDVLSEIMHSFAKCIGDGCLNNEHFEELGGILKAKLEEHFDEQVEESLQD | |||||||||||||
9 | 4gmxC | 0.09 | 0.08 | 0.86 | 1.42 | CNFpred | ------------DTIQLYKSEREVLVYLTHL--NVIDTEEIMISKLARQIDGWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKK---RGKDNKAVVASDIMYVVGQ------YPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQRESEPFIQTII----DIQKTTADLQPQQVHTFYKACGIIISEERNRLLSDLMQLPNMAWDTI-DSETVKIIANIIKTNVAVCTS-----------MGADFYPQLGHIYYNMLQLYRAVSSMISAQAEGLIATKTP----KVRGLRTIKKEILKLVETYISKARNLDDVVKVLVEPLLNA--------DYMNNVPDARDAEVLNCMTTVVEKVG------MIPQGVILILQSVFECTLDMINK-PEHRVEFYKLLKVINEKSFAAFLELAFKLFVDAIC------------WAFKHNNRDVEVNGLQIALDLVKNI-FHKNYFFIFVSETFFVLTDSDHKSGFSKQAL | |||||||||||||
10 | 2qj0A | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | -----------LGVDFIDTLLLYQLENEKLDK--FEYLNDCFRRNQFQEIDRLVIGYGVVALICNGAFINYTGIVSNVNSYTDFLSQIIQRAILEGT--ALDLLNAVFPTLLEYCKHVEIYNNVLTIFELFVTIAEIFTKIDGFFADY----DFERKTILGPILSLS-I-HELQAEHKVV--------------------HIANKNHLRRADHPPFLSSNGFSNI------------------------T-LLLVRFSQ----PFLDYKKIKIDANYFNNPSLFISKPNFISDC---------------STFLIRV--FPFKQI-KL-PLI-PDQIG-VENVD------------------------NADFLRAHAKCPELVPLKGKLVLLGFDIFENKNLLYALLDFYVIVE-KT------GSSSQFYDKFNSRYSISIIL-EELYYKIPSYKNQLIWQSQNNADFF------VRFVARLNDLTFLLEGQKSSCGLADKSKLALTTVYILSFISAVADERSF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |