>PF14757 (272 residues) VKSYPRWTPPPPPPRVQPRKTKPVKSLPENKPVPAPRRKVGSDCGSPILMGDNVPNGWED FAVGGPLDFPTPSEPMTPLSEPVLMPASQHIPRPVTPLSGPAPVPAPRRTVSRPMTPLSE PIFVSAPRHKFQQVEEANPAATTLTYQDEPLDLSAFSQTECEASPLAPLQNMGILEAGGQ EAEEVLSGISDILNDINPAPVSSSSSLSSVRITRPKYSAQAIIDSGGPCSGHLQREKEAC LSIMREACDAAKLSDPATQEWLSRMWDRVDML |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VKSYPRWTPPPPPPRVQPRKTKPVKSLPENKPVPAPRRKVGSDCGSPILMGDNVPNGWEDFAVGGPLDFPTPSEPMTPLSEPVLMPASQHIPRPVTPLSGPAPVPAPRRTVSRPMTPLSEPIFVSAPRHKFQQVEEANPAATTLTYQDEPLDLSAFSQTECEASPLAPLQNMGILEAGGQEAEEVLSGISDILNDINPAPVSSSSSLSSVRITRPKYSAQAIIDSGGPCSGHLQREKEACLSIMREACDAAKLSDPATQEWLSRMWDRVDML | |||||||||||||||||||
1 | 3ideB1 | 0.07 | 0.06 | 0.85 | 0.83 | DisCoVER | ATATYLKSIMLPPA-SIPDTRHILKQETSSNLEVSGSGVCFPGAPGSRIGAHYRWLETQDLKKAFNYGRLISRKYDIQSNGTLNAATFEGSLSEVESLTYNSLMSLTQDKVNNQLV-TKGVTVLNLPTGFDKPY--V---RLEDETQGMNGAKMRCTAAI---APRSGNGNVPG------VLR--------PITLVAYEKMTPLSILT-VAGVSNYELIP-NPEL----------LKNMV-TR--YGKYDPEGLYAKMILSHREELDIRTV- | |||||||||||||
2 | 6s8bK | 0.06 | 0.04 | 0.73 | 0.67 | DEthreader | IFLKNILLSNIQ-----------------------DTIGVA-D-FISK-----GR-K-TRDL--WISYLVSLLWVITWFEEYGPVISLFNQFY-FYLLEKLKFIPIIPGRITLILPGLICFKVKYNEGWRLIEGLRC---------------------TPLNIR--V------KQVSVTYKYLVS-FKKSKL--VKV---LGDLLGTPYLWSISANRGLLEYAGG-D-LLAMLVVLFIESRRAFFGLMCLENGFVPSLPIV-GRSYS-YLEE | |||||||||||||
3 | 1vt4I3 | 0.05 | 0.05 | 1.00 | 0.84 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5iwkA | 0.07 | 0.07 | 0.99 | 0.65 | EigenThreader | LLQQKRIWESPLLLAAKENNVQALYKLLKFEGCEVHQKGAMG---ETALHIAALYDNNEAAQVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVPNNQGLTPFKLAGVEGDSSGDDQSLLELIVTTKKRQTILGGPFHVIIVTYAFMPMSFALVLGWCNVMYFAQMAVVILGFASAFYIIFQTGHFYDYPMALFSTFELFLTIID | |||||||||||||
5 | 4yo3A | 0.16 | 0.06 | 0.35 | 0.33 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------VRHDTLHQLRIAPPGPDRRASLKRQNWLSLLEQCDD---------FARASHL-WLDLQW--YIHQALLQTGK--ENYAAIIQYDLKGLLLRFNDG-PFADDVTLSWIQQQ------- | |||||||||||||
6 | 2j0wA1 | 0.14 | 0.04 | 0.29 | 0.38 | MRFsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVSKFGGTSDFDAMNRSADIVLSVRLVVLS---------------ITNLLVALAGERFEKLDAIRNIQFAILERLR-----YPNVIREEIERLLENITVL | |||||||||||||
7 | 5mqfT | 0.10 | 0.09 | 0.93 | 0.52 | FFAS-3D | ----------KNSLAYQRMSWEALK-----KSINGLINKVNISNISIIILLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEV-----AIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDINLVSFAIQSSLDFEECAHKLTKELCNMILDCCAQQRTYEKFFGLLAGRFKEQYDTI | |||||||||||||
8 | 4btgA | 0.12 | 0.12 | 0.97 | 1.01 | SPARKS-K | VYRVGRTATYPNLRRMSSVDSKMLQATFKAKGALAPAQHLANAATTAFSRGNFDANAVVSTILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFIRGRAEVIFSDEELSSTIIPWFIEAMSEVSPF---KLRPINETTSYIGQTSAIDHMGQPSHVQFAKEITAFTPVKLANNSNQRVEPGISDRMSATLAPIGNTFAVSANRTAVYEAVSQRGTAEMTL----GFPSVVERDYMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAV | |||||||||||||
9 | 3nmvB | 0.11 | 0.02 | 0.20 | 0.38 | CNFpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HFFGVYDGHSQVANYCRERMHLALTEEIVKEKPEFCWQEKWKKALFNSFMRVDSE | |||||||||||||
10 | 5nrlA | 0.03 | 0.02 | 0.73 | 0.67 | DEthreader | -------------------FDDDDKPTLEKSRLGNRY-Y---------RIKRGA-------------------NYQNISPVEAEKIDFTLNRL---------DPNADITNLIFLDRS--NEEKKDRIRGIKVAAK-NTSLISLFILVKGETRNLNSKMPTR---------SDLSWIETILEHTLGTLSPIN-LVQLDLTGIWQIHEIVFDCLDGLDVLQIESVHEWITNKMPS--FS-KNEWRKSAIANTLLYLRLIISDVKIQGHVGSVSD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |