Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MATFSATGFGGSFVRDWSLDLPDACEHGAGLCCEVDGSTLCAECLRGCEGMEQCPGLFMGLLKLASPVPVGHKFLIGWYRAAKVTGRYNFLELLQHPAFAQLRVVDARLAIEEASVFISTDHASAKRFPGARFALTPVYANAWVVSPAANSLIVTIDQEQDGFCWLKLLPPDRREAGLRLYYNHYREQRTGWLSKTGLRLWLGDLGLGINASSGGLKFHIMRGSPQRAWHITTRSCKLKSYYVCDIAEA |
1 | 5ouoA | 0.04 | 0.04 | 0.92 | 0.65 | DisCoVER | | NLPKQLTQATQVAWSGPPPGFA-KCQVVILGFAMHLNFNFRIISCPPGREKCDGVGTATDEGRIYILCGIEIQQVVAESLEASCVVVGGFGISVRGGSDGLDSFSIESCTTGQTICTKAPTRG----SEKNFLWMMCVDKQYPGLRELVNVAELGSHGNANKDGNVDVKCPANSSIVLGYVMEAH-T----NM--------QFVRDKFLQCPENASECKMTGKGV-DHGMLWLFDRHALFGWIICKT-- |
2 | 1h19A | 0.08 | 0.06 | 0.74 | 0.67 | DEthreader | | THLHLRCSVF---L-A-LVVLDTKDERQSYKGSM-EISFETSPKSS--------------FSQCIHRDTPSVKL-----VALMSAIRFIALVVGALESSEKEQVEKSAYEFSETE--MLKIAEDLGGPYVWPCLTFVTPTLLLVIAHEISHSW------------GNLVTNKT-WDHFLNGVYAGGENSTFHPFTKL------------VVDLIDPAYSPYE---HNSEFMATRFMHVT---------- |
3 | 1vt4I3 | 0.10 | 0.10 | 1.00 | 0.72 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 1st8A | 0.07 | 0.07 | 0.96 | 0.58 | EigenThreader | | IIWGHAVDLVNWIHLDPAIYPTQEADSKSCWSGSAPGNLYTGSDSKSRNPLITPPEGVKDDCFRDPSTPDGVWRIVVGGDR-DNNGMAFLYQSTDFVNWPLSSADAT------GTWKAGFEGLSLTGSTLDLRYFYASKS--FFDDAKNRRVLWAWVPETDSLQSLWIDRNGK--QLIQWPVEIHGIAASQADVTISFKLEGALGPFGLLAMASQSAIFFRVFQNQLGRSDLSRSTHSIIESFGAGGKT |
5 | 2xoaA1 | 0.15 | 0.10 | 0.65 | 0.27 | HHpred | | ---------TDDEVVLQCSATVL--KEQLKLCLAAEGFGN-RLCF-------LEPT--SNA---QNVPP---DLAICCFTL--------------EQSLS-VRA------LQEML------ANGHRLLYGHAILLRHAHSRMYLSCLTKLAFDVGLQEDTGEACWWTMHPASKRSEGEKVRVGDDSVSSERYLHLST---------LQVDASF-----------MQTLWNMNPIC-------------- |
6 | 5yzvA | 0.12 | 0.08 | 0.66 | 0.57 | MRFsearch | | ----LAGGSGDKLIHVWDVASGDELHTDWVRAVAFSGALLASGSD-------------DATVRLWDVRHTHYVLDIAFSPD-------------------------------------------------GSMVASGSRGTARLWNVATGTEHAVLKGHTDYVYAVAFSPD---GSMVASGSRD-----------GTIRLWDVATGKERDVLQAAENVVSLAFSPDGSMLVHGSDSTVHLWDVA----- |
7 | 2gtlO | 0.14 | 0.08 | 0.61 | 0.27 | FFAS-3D | | ------------------------CDEHEHQC--GGDDPQCISKLFVCDGHNDCRN-GEDEKDCTLPTKAGDKFIVCFDHCTKRRPEHMTLAFESSSIAAFFTPI------ADLHVHIEIESETDEDESEVSMPADGEYDHRLTIHPPEEGLVGEFDGYNFDRFVGHIVHELSEEVCAEFIFHRKK--------------------------------------------------------------- |
8 | 6t96A | 0.10 | 0.09 | 0.92 | 0.54 | SPARKS-K | | GSSWSWHSLNEGATSKPAVHINSRGTDNALWHNWQTVPG------AGWSGWQSLGGQITSNPVVYINRGADNALWHIWQTAQSLNGVLTSDPTVYVNA-------SGRRSNDYSLWYIKQTASHTYPWTNWQSLSGVITSNVVISNSDGRLEVFARGS--DNALWHIWQVAPNAG------WTNWRSLSGIITSDPAVHINAGRLEVFARGPDNALWHIWQTATSDAWSEWTSLSGVITSAPTVAKNSD |
9 | 3sn6B | 0.10 | 0.07 | 0.71 | 0.88 | CNFpred | | -----------------------------IVTSSGDTTCALWDIE----QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCRQTFTGHES------DINAICFFP-------NGNAFATGSDDTCRLFDLRADQELMTYSH-ICGITSVSFSK-----SGRLLLAGY---------DDFNCNVWDALKADRAGVLAGDNRVSCLGVTDDGMAVATGS--WDSFLKIWN---- |
10 | 1qcxA | 0.04 | 0.03 | 0.72 | 0.67 | DEthreader | | AGVVGAAEGAHGVTGGGAPVYPTTT-----VSYLGNPRVIILDQTFDFGTEAIVIKGK-GLRVAKNV------I-QNIAVTDINPKGGDAI-TVDDS--DLVWIDHV-TTARIRQHIV------SATCNGHHYWGVYLMVTLKG-----HAVNNLFHNFDGHAFEI---G--------YVLA-----------TPIQLFSSCVFSCQLNAFNSGSMSGSD-I---AAHPPGAI---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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