>PF14744 (345 residues) FLYWHRTVFPIYLDDVYENAVDAARIHYMFSALRDCVPTMLHAKHMESCDQLLECYDTEI MEILNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFKVGMKDLSHFFSLKPIRFFNRFID IKAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLVMTEAHLPSQTLEQGLDVLE IMRNIHVFVSRYLYNLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTVNFTYQ FLRKKFYIFSQFMYDEHIKSRLIKDIRFFRETKDQTDQKYPFERAEKFNRGIRKLGLTPD GQSYLDQFRQLISQIGNAMGYVRMIRSGGLHCCSSAIRFVPDLED |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FLYWHRTVFPIYLDDVYENAVDAARIHYMFSALRDCVPTMLHAKHMESCDQLLECYDTEIMEILNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFKVGMKDLSHFFSLKPIRFFNRFIDIKAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLVMTEAHLPSQTLEQGLDVLEIMRNIHVFVSRYLYNLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTVNFTYQFLRKKFYIFSQFMYDEHIKSRLIKDIRFFRETKDQTDQKYPFERAEKFNRGIRKLGLTPDGQSYLDQFRQLISQIGNAMGYVRMIRSGGLHCCSSAIRFVPDLED | |||||||||||||||||||
1 | 3p8cB | 0.09 | 0.08 | 0.92 | 1.24 | MAPalign | LSIFCSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMS-CTHELCPEERHHIGDRSLSLCNMFLD-EMAKQARNLITDICTEQCTLSDVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSIAKPSELLTSVRAYMTVLENYVQIDITRVVQTQHLDITSLYTNWYLETLLRQVSHIAYFPAMKAFVNLPTENELNAESDISEMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVNVDVLTQMRT-----------------SFDKPDQMAALFKRLS-------SVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSS-- | |||||||||||||
2 | 3p8cA | 0.12 | 0.12 | 0.97 | 1.07 | CEthreader | IQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYNDSAHYALTR-FNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLELAIGLLEINRMTHKLLSRYLTLDGFDAMFRNVSAPYGRITLHVFWELNYFLPNYCYNGSTNRFVRTVLPFSQENFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVM----------PKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQN | |||||||||||||
3 | 3p8cB | 0.07 | 0.04 | 0.61 | 0.83 | DEthreader | IFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELC-PEER-HHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQH-ETNLDKLHTASLCFSINYVNMVVWEHTFTPREYLTSHLEIRFTKSIVGTPSLLTSVRAYMTVLQSIYVIDIRNVLQQTQHLDPTTSLYTNWYLETLLRQVSNG----WHSQRIIGVILSFR-------------------------------------------------------------------------------------NVMS-------------------------------------------- | |||||||||||||
4 | 3p8cB | 0.06 | 0.04 | 0.59 | 0.83 | DEthreader | IFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEE-R-HHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQKPGVSMRTLDHTSLCFSINYVNMVVWEHTFTPREYLTSHLEIRFTKSIVMTLLTVRAYMTVLQSIENYVQIDITRFNVLLQQTQHTTSLYTNWYLETLLRQSN-------MWHIQIIGVILSFR------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
5 | 3p8cA | 0.15 | 0.14 | 0.91 | 0.67 | HHpred | --LWFRESMPWILTHILETASMMEYVLYSLDLYNDSAHYALTRFNK---QFLYDEIEAEVNLCFD-QFVYKLADQIFAYYKVMAGSLLLQGIHLPPS---NRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYDLTSIVELDLEINRMTHKLLSR--YLTLDGFHNVS--APYGRITLHVFWENYDFLPNYCYNGSTNRFVRTDKGSKALNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQTILQYVK----------TL--MEVMPKIRLPRHEYGSPGILHHQLKDIVEYAELTVCFQNLR----EVGNAILFCLLIEQSLSLHAAPFQNILPRVH- | |||||||||||||
6 | 3p8cB3 | 0.09 | 0.04 | 0.50 | 0.59 | DisCoVER | MKSELMWHISSQVAELKSVLKRMTIIGVILSFRSLAQEALRDVYELSSAA-GLPCIDPALVVALYKIACLLMVFVAV-SLPTLASMSQYSPAIEGHCNNI---HCLAKAINQIALFTIHSIEDRLKEFLA-LASSSLLTTRNRESVYLLLDMIVQESPFLTMLESCF----------------------------------------------------------------PYVLLRNAYHAV---Y-------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3p8cB | 0.11 | 0.09 | 0.85 | 0.65 | MRFsearch | -FCFYSRAFEKMFQQCLEQSRYSIAFPLLCTHFMSCTHELCRHHIGDRSLSLCNMFLDEMAKQARN-LITDICTEQHCAKTISQAVNKEKPGVESMRTALSELCFSINVPNMVVWEHTFTPREYLTSHLEIRFTKSPSELLTSVRAYMTVLQSIENYVQ----------------IDITRVFNNVETLLRQIAYFPAMKAFVNLP-----SDISEMRSLSELLGPYGMKFLSESL---MWHISSQVAELKKLVVE------NVDVLTQMRTS---------FDKPDQMAALFKRLS-------SVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVS--- | |||||||||||||
8 | 3p8cA | 0.12 | 0.12 | 0.99 | 0.81 | SPARKS-K | QFPIEMSMPWILTDHILETKEMMEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLELADGLLEINRMTHKLLSRYLTLAMFREANHNVSAPYGRITLHVFWELNYFLPNYCYNGSTNRFVRKQPNAQPQYLHGSKALNLAYSSIYGFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQTILQYVKTLMEVMICRLPPGILEFFHHQLKDIVEYAELKT---VCFQNLREVGNAILFCLLIEQSLSLEEVCAAPFQNILPR | |||||||||||||
9 | 3p8cA | 0.10 | 0.10 | 0.97 | 1.08 | MAPalign | LSQLWIEMPWILTDHILETKSMMEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSAIGRFVELDGLLEINRMTHKLLYLGFDAMEANHNSAPYGRITLHVFWELYDFLPNYCYNGSTNRFVRTHGSKALNNFVGPPHFQVI--------CRLLGYQIAVVMEELLKVVKSLL-QGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVYAELKTVCFQNLREVGNAILFCLLIEQSLSLEEVCDLLHAAPFQNI-- | |||||||||||||
10 | 3p8cB | 0.12 | 0.12 | 0.98 | 0.79 | CEthreader | IFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCT-----HELCPEERHHIGDRSLSLCNMF-LDEMAKQARNLITDICTEQCTLSDLDKLHTALSELCFSINYVNMVVWEHTFTPREYLTSHLEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHGEPTITSLYTNWYLLRQVSNGHIAYFPAMKAEYSDISEMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRPDQMAALFKRLVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHDMKVAMNV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |