Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | AWSTHSVPNFSGAPCGNFISPFTCPVASRFPYGSLHRSCSGCTLPVNSPPSTTEMQLRRVLHDIRSSLQNLSQHSVMRGSDGSASGFSMQRSSVLPLYENTFQELQIMRRSLNLFRTQMMDLELSMLRQQTMVYQHLTEDERYEADQLQGLRNSVRMELQELELQLDERLLALEEQL |
1 | 6grjG1 | 0.07 | 0.05 | 0.77 | 1.00 | DEthreader | | -----------------------------QFP-N----K--DNQTQNQLDKGHADLYLNTIQPQIITNISNISNYFALQNA-IP-A-VLPPSTQWRQLSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVATQIGNGYKGLQVQAQNAVTAATQ-SNAWDSLTSDLGSLI |
2 | 1a7mA | 0.03 | 0.03 | 0.86 | 0.51 | DisCoVER | | NATCARHPCHGNLMNQIKNQLAQL---NGSANALFISYYTAQGPFPLDLC--GPNVTDFEKAKLVELYRMVASALTITRDQKVLNPSAVSLHSKLNAT-----IDVMRGLLSNVLCRLCNKYRVGHVDVVPDHSD-KEVFQKKKLGCQ--L--LGTYKQ-VI--SV--V--VQ--A- |
3 | 3p9dE1 | 0.08 | 0.06 | 0.81 | 0.83 | DEthreader | | ---------DGATILSKLLV-----QLSKSQVLASALLDQALELIIANGFDEAAKLAISKLEETCDSASNDELFRFLLEMAVEVINVMDKDR-------KDVDLCVVRNLV---VVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLA--D--GK-QQ-LL---- |
4 | 1sumB | 0.08 | 0.05 | 0.62 | 0.51 | CEthreader | | ------------------------------------------NRLLNEKVEEFKKGVLKAGWFIEKMFRNSI--------------------------SSLVERNESLAREVIADEEVVDQMEVEIQEKAMEVLGLPIGKPLLTVTAGIRVAELIENIADKCHDIAKNVLELMEEPP |
5 | 3zciA | 0.07 | 0.07 | 0.99 | 0.68 | EigenThreader | | --GAEDITSGLKQLDSTYQETNQQVLKNLDEIFSEGEEDALNIATAAIALRGDLALLKANFEANELFFISEDVIFKTYSSPELLLTYKINSDKVLVLYCEGKLKIEATAQNIRERLETSLKAYQSNIGGTASLITASQTVESLKNKNFIKGIRKLNKVFLNYLEELDALERSLEQSK |
6 | 6nctB | 0.18 | 0.12 | 0.69 | 0.33 | HHpred | | -------------------------YNPKLD--YPVSKYQ-------QDEDNIEA-VGKKLHEYNTQFQEKSREY---------DR-------LYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERY-SKEYIEKEIHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYRE-- |
7 | 6flnA | 0.14 | 0.08 | 0.58 | 0.32 | MRFsearch | | ---------------------------------------------LSQASADLEATLRHKLTVMYSQINGAS------------------------------RALDDVRNRQQDVRMTANRKVEQLQQEYTEMKALLDASETTSTRKIKEEEKRVNSKFDTIYQILLKKKSEIQTLK |
8 | 4gfqA2 | 0.09 | 0.06 | 0.62 | 0.63 | FFAS-3D | | --------------------------------------------------AMGQQVLKFSNEKMEKAVAAYS--------------RELATVRAGALTEERRRDLKVVKKYAEEAKVAVRNVRRDGNDKKLEKAGEITEDDLRGYEDIQKETDKYIAKVDEIAKNKEKEIMEV---- |
9 | 6e6aB | 0.10 | 0.09 | 0.86 | 0.77 | SPARKS-K | | ---------HLYQDLQREVGSLKEINFMLSVLQKEFLHLSKEFATTSKDLSAVSQDFYSCLQAFRDNYKGFESDEYKNSTEEMRKLFSQ-------------EIIADLKGSVASLREEIRFLT-PLAEEVRRLAHN-QQSLTAAIEELKTIRDSLRDEIGQLSQLSKTLTSQIALQR |
10 | 1fioA | 0.14 | 0.08 | 0.60 | 0.56 | CNFpred | | ----------------------------------------------------KISQINRDLDKYDHTINQVDSLHKRLLTE------------------VNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSAQRDGI-HDTNKQAQAENSRQRFLKLIQDYRIVDSNYKEENKEQA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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