>PF14688 (304 residues) NLLSWIKTNSKISRKKSQESRDYSKDVKEITGRLKKMVGVRAIGWHTNWGPRRFTACLTS LEKVSENHPIVVKKFLFGRNVVFTDRNGVSLSGEVCLNHTDVPQVWLMRLSSVPAYDAVI ERLPYMEQELSRLLCHIKIRRRERHHIVMAEEYEVLLNKILNTMRRNQDLVRRMFRSGDL SRLEMVVEGSSAPLTLTNLGQYLIPVSMPGSMIVDFIAKTQQQAEERLKDAISLKMIEDE VIQQCQDKLGLIHLEKDLNISPAQMTQCCERLMDNADEITTYMEGVRVRVTQYYSVTDDG TLRI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NLLSWIKTNSKISRKKSQESRDYSKDVKEITGRLKKMVGVRAIGWHTNWGPRRFTACLTSLEKVSENHPIVVKKFLFGRNVVFTDRNGVSLSGEVCLNHTDVPQVWLMRLSSVPAYDAVIERLPYMEQELSRLLCHIKIRRRERHHIVMAEEYEVLLNKILNTMRRNQDLVRRMFRSGDLSRLEMVVEGSSAPLTLTNLGQYLIPVSMPGSMIVDFIAKTQQQAEERLKDAISLKMIEDEVIQQCQDKLGLIHLEKDLNISPAQMTQCCERLMDNADEITTYMEGVRVRVTQYYSVTDDGTLRI | |||||||||||||||||||
1 | 1jkyA2 | 0.11 | 0.05 | 0.49 | 0.71 | DisCoVER | ---------------------KIQEAQLNINQENKALGLTKLITFNVHNYASIVESAYLILNEWKNNISDLIKKVTNVGRFVFTDITKGLYSRSILLHGPSDS-----------------------------------EGFIHEFG----------------------------------------HAVDDYAGYLLDKNQSDLVT-N----------------------------------KKFIDIFKE-EGSNLTSY-------G---R----------EA--EFFAEAFRLMHSTPKTF- | |||||||||||||
2 | 5n4aA | 0.09 | 0.06 | 0.72 | 0.67 | DEthreader | -PVSSKKTQAGGTDVFAVALRLATIVWDQLIKSLSNAKQNAWKAHVVLK----V--DW-S-PINH----------L----IITGGCKYKVWDRLLFVAVGQCDRMG-WAY----SKIHLNT--TLSWTADSTQ--L------------QVVDLVDDMRVIKATATQLKDTD-SAGRGLRTELLNAQ--------IAVLDQ------------------DT-QGRPVGEPWIAQLIVIDLYLAKLAAM---CDSARWHDSTA-MLSWYYPSEVKLLAKTRYTKSDSDFQIQLFAC----S----- | |||||||||||||
3 | 5l0rA | 0.08 | 0.08 | 0.95 | 0.52 | CEthreader | CYHGVIEEDLTPFRGGISRKMMAEVVRRKLGTHYQITKNRLYRENDCMF-PSRCSGVEHFILEVIGRLPDMEMKWMEPAIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPIYPTGLGRWDLFREDLVRSAAQWPWKKKNSTAYFRGSRTSPERDPLILLSRKMKDTLGKPAAKDVHLVDHCKYKYLFNFRGRFKHLFLCGSLVFHVGDPQLKPWVHYIPVKTDLSNVQELLQFVKANDDVAQEIAERGSQFIRNHLQMDDITCYWENLLSEYSKFLSYNVTRRKGYDQIIP------------- | |||||||||||||
4 | 4ciuA | 0.07 | 0.06 | 0.89 | 0.67 | EigenThreader | LKPALARGTLDEYRQYIPSVEDTIAILRGLKERYELHHHVQIT---DPAIVAAATLSHRYIIDLID----EAASSIRQID------SKPTRLLRNKVTDAEIAEVLARWTGIPVSLHHRVAVDAVSNAIRRSRAGPIGSFLFLGPTGVGKTELCKALANFFHSVSRL------VGAGGRRPYSVILLD-AVEKAHDFRNTVVITSNLGKELVLGVVSHNFRPEFINRIQHIASIAQIQLKRLYKRLEER-GYEIHISGARPLKRAIQQQIQILSGEL-----VPGKVIRLEV---NED---RIV | |||||||||||||
5 | 3qaeA1 | 0.16 | 0.04 | 0.27 | 0.28 | HHpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIGQVALYQVANPKLAQEKIASKKAELLELANQAYPS---------IVKRGGGARDLHVDEAMGANMLNTMLEALKPVLEELS---QG-QSLMG------------- | |||||||||||||
6 | 3o3mA | 0.13 | 0.10 | 0.77 | 0.48 | MRFsearch | -LCAYARTNFGLLENFLLCCNNICNQVIKWYENISRELDIPLIMIDTTVTQSRIDYIKAQFEEAIK-----QLEIISGKKF--------------------DPKKFEEVMKISAENGRLWKYSMSLGFDLFTYMAVIVCAR-------GKKETTEAFKLLIEELEDNMKTGKS--SFRGEEKYRIMMEG--------------IPCWPYIGYKMKTLAKFLDRMTKYRVDSLVMSLIQYEMQRRAAEETGLPYAGFDGDFTNAQFETRIQGLVEVMEERKKL---------------------- | |||||||||||||
7 | 1cunA | 0.12 | 0.07 | 0.61 | 0.89 | FFAS-3D | DEESWIKEKKLLVSSELTGVQNLRKKHKRLEAELAAH-------------EPAIQSVLDTGKKLSDDNTEEIQQRL-----------------------AQFVDHWKEL----------KQLAAARGQRLEESL--------------EYQQFVANVEEEEAWINEKMTLVASEDYGDTLA---------------------------AIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKNITAKM-------------KGLKGKVSDLEKAAAQRKAKLD-------------------- | |||||||||||||
8 | 6w2wA | 0.12 | 0.09 | 0.70 | 0.59 | SPARKS-K | EVNERVKQLAEKAKEA-TDKEEVIEIVKELAELAKQSTD-----------PNVVAEIVYQLAEVAEHSTDP-----------------------------ELIKEILQEALRLAEEQEELAEAARLALKAARLLEEARQLLSKDPENEAAKECLKAVRAALEAALLALLLLAKHPGSQ------------------------------AAQDAVQLATAALRAVEAACQLAKQYSDIAKKCIKAASEAAEAEEAQRHPD--SQKARDEIKEASQKAEEVKERCERA------------------ | |||||||||||||
9 | 1hciA | 0.06 | 0.05 | 0.77 | 0.65 | CNFpred | GYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLHQDRVEQIAAIAQELNELDYHDA-VNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLH----------------LEFAKRAAPFNNWMEGAME-------------------------------DLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRIS-TVTMDELRTKWDKVKQLVPIRDQSLQ-------------------- | |||||||||||||
10 | 3h7nA | 0.08 | 0.07 | 0.78 | 0.83 | DEthreader | CLS-RI---D--ANLLQYYEKPEPNNT--VD--LY--VSSSTLLTFYPLDAHGKT-IN--I-----------H--LPNAS-LTIQELLVNVILLTLQLPLSFATLNGEWF--HL--QNP--YDFTVRV---------PHFLFYVSPFSVGLKYEPLL-FNDNSYL-KS---L-RFFSRSDYDSVISCKLHERYLIVLTQCHLKIWDLTSF-TL-IQD-YDMVSQSFRKVLLPENG-LSAIWS------------IVDLVLNLIVLWKLQESVN-KSLVDLQSERKTNEASITEIILVNYNHSLY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |