Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | PFPFFSSSRLVKNRILNSLTLPNKKHRSSSDPKGGKLASSDSKSGLRRNRTVTEPSSSIDFTPGDEFNPVFRVPKIQTLRLETSFVGSKHTEDTDSTPSIGENDLKLPK |
1 | 2pffB | 0.11 | 0.02 | 0.17 | 1.18 | MRFsearch | | ------------------------DDDYGFKQGGGGGGGGGG------------------------------------------------------------------- |
2 | 5jcss | 0.11 | 0.11 | 1.00 | 1.10 | SPARKS-K | | DFVSIDDGIKKIKLNEPDMSIPLKHYVPSYLSRPCIFAQVHDILLLSDEEPIEESLAVIPISHLGEVGKWANNLNCTEYSEKKIAERLYVFITFLTDMGVLEKINNLYK |
3 | 3j39f | 0.04 | 0.03 | 0.68 | 0.64 | DisCoVER | | KYKRHGRLFAKAVFTAILK-I--EGARRKEHGSYVGKRCVYAVWGKVTRINTGAVRARFNRNLPGHAMGHR-IR------------------------------IMLY- |
4 | 7bwmA2 | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | | GLGL-PQQRT--ESG-GAMLKVVQLKATNPRR---HPGPETKSAHTA-AAQQGLLR----------TTTAALPEHPNALAF---QV---SVVEPKKVTQDKLDDKNLDP |
5 | 3h0rE3 | 0.07 | 0.06 | 0.86 | 0.69 | CEthreader | | FYPDLPKGYQISQ----------YEKPLATNGWVELNLPNGEKKKVRIRRLHIEEDAGK-----NIHEGDKTLVDLNRAGTPLMEIVTEPDIRTPEEARLFLEKLRNIM |
6 | 4wsbA1 | 0.04 | 0.04 | 1.00 | 0.60 | EigenThreader | | CRASEYIMKAVYINTALLNSSCTARSHLRNDTDTDPRNEIHKWEKYKIKMKWGMEMRRCLLQSLQQVESMIECRVLLAKSVFNSIYASIEECIINDPWVLLNASWFNSF |
7 | 4jhcA1 | 0.08 | 0.06 | 0.77 | 0.19 | HHpred | | PKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPQVLRLAQEAQSLASDHLI--IGSDQVYTGLALFNSA-N-GHLQTEVEP--------------------- |
8 | 1vt4I | 0.10 | 0.04 | 0.36 | 0.58 | MRFsearch | | ---FEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------------------- |
9 | 2xd8A | 0.12 | 0.11 | 0.93 | 0.47 | FFAS-3D | | ----MANANQVALGRSNLSTGTGYGGATDKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSL----QFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDD |
10 | 6f1tg2 | 0.09 | 0.08 | 0.94 | 0.95 | SPARKS-K | | VVSCLDWSSQYPELLVASYNNNEDAPHEP-DGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQI----VLWDNRSNKRTPVQRTPLSAAAHTHP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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