>PF14661 (226 residues) LWMYLLALGFEPGPATIACGKIESHTHLGVNMFDKLNRDAFQIVSYFLFQTLDQSLTKEV FKFCWPPFDQKSDSEFRKHCCEWLKKISAECGNSFPQVVGSLFLSPGGPKFIHLMYHFAR FVALKYIKTNSKNSSLHFTETFNVKPQDMHKCMARWHVSRNRFLQILQREDYVTQQYQEN AQLSVKQVRNLRSECIELQNQIKKMEPCEDESNIQEKIQKVRSLWT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | LWMYLLALGFEPGPATIACGKIESHTHLGVNMFDKLNRDAFQIVSYFLFQTLDQSLTKEVFKFCWPPFDQKSDSEFRKHCCEWLKKISAECGNSFPQVVGSLFLSPGGPKFIHLMYHFARFVALKYIKTNSKNSSLHFTETFNVKPQDMHKCMARWHVSRNRFLQILQREDYVTQQYQENAQLSVKQVRNLRSECIELQNQIKKMEPCEDESNIQEKIQKVRSLWT | |||||||||||||||||||
1 | 1eq1A | 0.04 | 0.03 | 0.60 | 0.86 | DisCoVER | KEFQKTFSEQFSLVN----------SKNTQDFNK--------ALKDGSDSVL---------------------QQLSA-FSSSLQGAISDANGAKLERQEKTAEPDVEKEANAFKDKLQAAVQTTV------QESQKLAKEVA------SNMEE-TNKKLAPKIKQA--YDDFVKHAEEVQKKLHEAATK------------------------------------ | |||||||||||||
2 | 6r9tA | 0.07 | 0.05 | 0.77 | 0.83 | DEthreader | ---------LVTLASVATI-TRLDVVGAASLG--AEDPETQV--V---------------------------L-INAVKDVAKALGDLIAQLKNKVTNVLLKTVKAKGTRALEATTEHIRQELAVFCS--PEPPAKDLRACAHVAPDVRLRALHYGRECANGYLELLLTHSKV----VDD-QWSGLSAARMVAAATNNLCEAANAVQGHASQEKLISS-KQV-AS- | |||||||||||||
3 | 2ve7D | 0.08 | 0.08 | 0.99 | 0.51 | CEthreader | SFPRYNVAEIVIHIRNKILTGADGKNLTKNDLYPNPKPEVLHMIYMRALQIVLEHFYMMPVNSGVMYPHLMEGFLPFSNLVTHLDSFLPICR--VNDFETADILCPKAKRTSRFLSGIINFIHFREACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVDEDTTVTIPSAVYVAQLYHQVSKIEWEYECEPGMVKGIHHGPSVAQPIHLDSTQLSRKF | |||||||||||||
4 | 5td8A | 0.10 | 0.09 | 0.88 | 0.98 | EigenThreader | IQEEIYDYLKKNKFDIETNH----PISIK--FLKQPTQKGFIIIFKWLYLRLDP---------GYGFTKSIENE--------IYQILKNLRYPFLESINKSQISAVGGSKFLGMLHWMVRTNIKLNQNTQTLDEQDQRQERYELMVEKLLIDYFTESYKSFLKSTELKLEELKVDLNRKRYKLHQQVIHVIDITSKFKINIQSSLENSENELGNVIEELR-----N | |||||||||||||
5 | 5td8A | 0.16 | 0.14 | 0.86 | 0.63 | HHpred | IYDYLKKNKFDIET----------NHPISIKFLKQPTQKGFIIIFKWLYLRLDPG-----Y-----GFTKSIENEIYQ----ILKNL------RYPSINKSQISAVGGHKFLGMLHWMVRTNIKLDMCLNKVDRSLDEQDQRQERYELMEKLLIDYTESYKSFLKLEPSMQELKLGFEKFVHIINTDVTSTELKLEELKVDLNRKRYKLHVIDITINLENSENEL- | |||||||||||||
6 | 5td8A | 0.11 | 0.10 | 0.87 | 0.55 | MRFsearch | --DYLKKNKFDIET----------NHPISIKFLKQPTQKGFIIIFKWLYLRLDPGYG--------------FTKSIENEIYQILKNLRYP---FLESINKSQISAVGGSNWHKFLGMLHWMVRTNIKLDMCLNLDEQDQRQERYELMVEKLLIDYFTESYKSFLKLEPSMQELKLGFEKFVHIINTDVTSTELKLEELKVDLNRKRYKQQVIHVIDITSKFKINIQ | |||||||||||||
7 | 5td8B | 0.06 | 0.05 | 0.77 | 0.90 | FFAS-3D | LVICLQSCDFA---------------LATQENISRPTSDYMVTLYKQIIENFSVESLLNSSNQETGDGNIYLDTLNVLVLNKICFKFFEN--IGVQDFNMTDLYKPEAQRTQRLLSAVVNYARFREER-----------------MFDCNSFILQMESLLGQINKLNDEIKQLQKDFEVEVKEIEIEYSLLSGHINKYMNEMLEYMQ------------------- | |||||||||||||
8 | 6w2rA | 0.06 | 0.05 | 0.86 | 0.73 | SPARKS-K | ---------------------------GTTEDERRELEKVARKAIEAAREG-NTDEVREQLQRALEIARESGTKTAVKLALDVALRVAQEAAKRGNEVVVRIAEESNNSDALEQALRVLEEIAKAVLKSEKTE---DAKKAVKLVQEAYKAAQRAIEAAKRTAIKLAKLAARAALEVIKKSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVE | |||||||||||||
9 | 4lacA | 0.07 | 0.06 | 0.80 | 0.60 | CNFpred | ---------------------------------------NSIKKLSTIALALGVERTRSELLPFIVELAEDAKWRVRLAIIEYMPLLAGQLGVEY-SLCMAWLVDHIREAATSNLKKLVEKFGKEWAHAT------IIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQD | |||||||||||||
10 | 5ebzA | 0.06 | 0.04 | 0.69 | 0.83 | DEthreader | EMRER--LGT----GG-F------GN-CLY--RE------IKSC-R------------------ELSTKRERWCHEIQIMKK-LNH-ANV----V-KAC--DV-PEEL--PLLAM-EY-CSGGDLRKLLNKPENCCKVHYVLIHTVQSQDRVLKELFGHLSKLLGCKQKIIDLLPKVEVALSNIKEADNTVMFMQGKRQKEIWHLLKIAC----T-Q--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |