>PF14650 (366 residues) EQTSHLKYLEDHLQKKRIQLFWGLPSLHSESLPSAIHVSGDSPSVFIFNRVPNASTCQES SVPVQVPSLGLSESQAPTLSKSLPQSPPMPEVQPQAHLSFPITAQTSGPSQQIRICGVFF HRPQNEPDSLNSSDIDRLEWHLLQKQQENMWGLPALVQCSHKDFCSSPPISPQHRATHVH ESISILPGEFSLSDEIRGKLEYHLRKRLIQHRWGLPHRIVHSMSLLMPPEGLSQTSELES TQTPSRTTVLKGQSSKTLSFGLSHSGSYHESKRSGSFQLEKDVGKHQGHIAQKGSKDDPL NSSEEHLGDDSENNQNGHGVSLSGKDSRASEGTLHQNELENVLKVHLSKKFEEINEGRLP NTVRSS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | EQTSHLKYLEDHLQKKRIQLFWGLPSLHSESLPSAIHVSGDSPSVFIFNRVPNASTCQESSVPVQVPSLGLSESQAPTLSKSLPQSPPMPEVQPQAHLSFPITAQTSGPSQQIRICGVFFHRPQNEPDSLNSSDIDRLEWHLLQKQQENMWGLPALVQCSHKDFCSSPPISPQHRATHVHESISILPGEFSLSDEIRGKLEYHLRKRLIQHRWGLPHRIVHSMSLLMPPEGLSQTSELESTQTPSRTTVLKGQSSKTLSFGLSHSGSYHESKRSGSFQLEKDVGKHQGHIAQKGSKDDPLNSSEEHLGDDSENNQNGHGVSLSGKDSRASEGTLHQNELENVLKVHLSKKFEEINEGRLPNTVRSS | |||||||||||||||||||
1 | 6w6wA1 | 0.07 | 0.04 | 0.60 | 0.75 | DisCoVER | QRNLAG-SL--------VRLSALVKFILSIIVQLRPGTAY-VLTELRVVWMTSRLLVRYSRLLSYSGAVTGVLNEPAGLYELD---------QLGLCLAYQQRRVMRPGVCLQLQDVHLLQ------SVGGGTR-------------RPVLAPCL--R--G-----AVLLQSFSQKPRQAYGASLYE--QLV-------------------RQLGLPLYLWATKAL------ACKLCPHLRHHQFLQHSSPGSPSLGLQLLAPTLDL-------APPGS-------------PVRNAHNEILEEPHHC------PLQKYTR--------------------------------------------- | |||||||||||||
2 | 3og2A | 0.05 | 0.04 | 0.67 | 0.67 | DEthreader | ---------------FSGEV-----LYLDVFHKIVFVADGIFSLPFAATKAGIYAINGGP-I--PIDIYGHDGPLFQGGAF---DPFGGW-GFEQCSALVEFVFYNNMAGVTIF-----N--------------IYMTFGGTNLGHGYSYDYGASIKYELKLQGQFLSPGITATP------------------------------------------------------------E-NATQY-IVITPLLA-FFVVRHAYTVTIPQLGGSLTLQELHEFAVAKGSNVARQVIYMVDRN-------NYWVNPDSVIIN---IRSVAIKGASIKLAVNGKEPAIEIAQEYDIPLSFEFPVPEGILVEV | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 1.00 | 0.97 | CEthreader | QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 4kvmA | 0.06 | 0.06 | 0.99 | 0.65 | EigenThreader | QLSPKEITLFRTALKCYETKQYKKGLKAIEPLLERHPEHGESLAIKGILLHSLGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRADKDYVQAAKCYINAHKLEKNNSSLLRDLALLQSQLRQYKALADTRNALLQDNPGVRANWSALAV----AQFLRGEYASAYKIVDAFESTINQGVPVDTEDASGKVLDSAEWLNLYSQLEFLTHVDLYLRKKLKRGIPKYASSLSTTNKFSEDDDNSQIEIPTTLLWTYYFLAQHFDHVGELIDHTPTLVELFMTKARISKHKGIMDHARKLDLQDRFINGKCAKYMLRNDENELAAKTVSLFTRNEAVGGAVGDLADMYMLEDGKSFARQKKFALALKRF | |||||||||||||
5 | 2pffB | 0.17 | 0.11 | 0.66 | 0.46 | HHpred | ---FTPGELRSYLKGA---------TGHSQGLVTAVAIAETDSWESFFVSVRKAITYEAYPNTSLPPSILNNEGVP---SPMLSIS-NLTQEQVQDYVNKTNSHLPAGKQVEISL--------VNGAKNLVVSGPPQSLYGL-NLTL-RKAKAPSGLDQSRIPFSERKLKFSNRFLP--VASPFHSHLLVPAS-DLINKD---LVKNN------V-------------------SFNAKDIQDGSDLRVLSGSISERIVDCIRLPVKWE-----------TTTQFKATHILDFGPGGASHRDGVRVIVAGT------------------------------------------------------- | |||||||||||||
6 | 1vt4I3 | 0.14 | 0.04 | 0.30 | 0.40 | MRFsearch | -------------------------------------------------------------------ALHRSIVDHYNIPKTFD------------------------------------------SDDLIPPYLDQYFYSHIGHHLKNI----------------------------------------EHPERMTLFRMVFLDFRFLEQKWNASGSILNTLQQLKFYKPYIC---------------------------------------------------------------------------------------------------DNDPKYERLVNAILDEAHKQVQRG--------- | |||||||||||||
7 | 3cnfB | 0.10 | 0.09 | 0.95 | 0.53 | FFAS-3D | VSAVKARASEADISSIHLAIAREVPMFNVHELKKIAESFEDPSSALFFPTEFNRIKGDIQNVLFEFSGRNEKWDQALYLSEHFPALFSDVPLAGANTIIAIMRLFTPFLRTDDLAIAANFPRASRNPQTYIPTNQRGTVTNEFASRFRTERAVQDDMQKATRSCTKQTNNFATHVAVVLYEVLVVMPDYYDVVSRFANANLQMNNNREIADIFDQADFIQTSDAVRQLRALMPTLSTSQIRHAIERIAQITDVDSTDYGKLTLRFLGTLTRSLKMQ-----------NAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNPRIARRFNG------VRIMYLTDPDFV--- | |||||||||||||
8 | 4btgA | 0.09 | 0.09 | 0.99 | 1.22 | SPARKS-K | KGALAPALISQHLANAATSVLTILGRLWSPSLDPSLRNTNGIDQLRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIPWSPFKLRPINETTSYIGQTSAIDMGQPSHVVVYEDW-----QFAKEITAFTPVKLANDVEPGISDRMSATLAPTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTFPSVVERPMVAIAALRTDLKRSMFNYYAAVMHYAVAHNPVVVSEHQGVAAEQGSELRIPVGYNAIEGGSIRTPEPLENKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRILKPTVAHAIIQMWYSWFVEDDRTLAAARRTSRDDAE | |||||||||||||
9 | 3p8cB | 0.11 | 0.04 | 0.37 | 0.42 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------NLDKLHTALSELCFSINY---------------------PNMVVWEHTFTPREYLTSHLEIRFTKSIVGMTMYNTQEIAKPSELLTSVRAYMTVLQSIEN-----------------------------------------------------VQIDITRVFNNVLLQQT-------QHLDSHGEP---------TITSLYTNWYLETLLRQVSNGHIAYFPAMK | |||||||||||||
10 | 6u5vB | 0.04 | 0.02 | 0.57 | 0.67 | DEthreader | ------------RDLSIKQVEFIEHIAISLINGARN---F--C---VHWEATDGGLGVLHREQYSKIRVLFDGVFGGLNWAFTRIPFRNIDLKLGKLVEVFQKVTETPVQVADYLSRNGKTIEVEVKAYEEYSSMLVDVVFYRGMTM-----QVAVPRRSNYGMV-AVNPSRVSA-------------------------------------IVKLQEQMIKVKEHLYEIV-D-EVAAKSLKIDLERVIPLKG------------------------------QSVYDLTKSEKIKSILDNW---------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |