Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | LLTVIEEFYRKERRPVTRPDCMYETFDQCAESIGKKILEYQSQTDEYHNSCLIELRVQLRRFEELLPQVCWLVTENFKEHYWRRFSASMNEIWGQFQEQLKQLEKAKDKNAQKLHPNLGHPTNFQEMESLCHLEEKRQEELDSVIQANKEKLEEFAREYGQFFIANLANFTEKFLLQLDEVVTVDDVQVPRMEPPKQKTSILIRR |
1 | 6h2dP | 0.06 | 0.05 | 0.86 | 1.08 | FFAS-3D | | -MQQAEATIQSFSGLPQNAVNIQQNVGEVVAALLPQVQTMQQQVLAFAARLELQLQTLTAQTLTASQSANDRITQDNLQRIGVELQATIAGLQSNLDGARQELDSLNKKKLYLP--------GLIALAVTLTQTQNKVSSLEGQVNQIEGQIQQGFLGQTTAFSQQFGSLIDRVSKVGN---TISLLR----------------- |
2 | 4ke2A | 0.05 | 0.04 | 0.85 | 1.17 | DEthreader | | -----------------------------DPA-ARAAAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAVAAAKALYATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAATA-AAAAAAAIAFAAAP |
3 | 1eq1A | 0.07 | 0.05 | 0.71 | 0.61 | DisCoVER | | ---------------AF-E--------EMEKHAKEFQKTFQFNSLVNSKQDFNKALKDGSDSVLQQ------LS--AFSSSLQGAISDA--NG-KAKEALEQARQNVEKTAEELAHPDVEKEANAFKDKLQAAVQTTVQESQKLAKEVA-TN--KLAPKIKQAYDDFVKHA---E--E--VQKK--------------LHEAAT- |
4 | 2j69A | 0.07 | 0.05 | 0.80 | 1.00 | DEthreader | | -------------ARN-ELSLGYVNNCHR-----ERQVRTLARLACNHT-REAVARRLRIDSVEFNLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNF---F--------LFDFL-SSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTGKDVKQEIAQL-------- |
5 | 6gy6B | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | | AAFQTIAQIDEALADPSLSKDDREALTLERNNLIQNLSKHIDNVIVSFTGRTSKLTNKISDISDMVIAERLQDLVTQTESQKTELQSDIDPKTEKRNKLDADREKIIESQDVIRQNNIKILGKVSEGLKYIDLADARMKLSDQIDQLITETDELKAKIREVELRLSGLKDVMQIDTERTTLLTEAVKIEQVWISFAEQLHKLSND |
6 | 4ckgA1 | 0.07 | 0.06 | 0.98 | 0.85 | EigenThreader | | KL-----DFEECLKDSPRFRASIELVEAEVSELETRLEKLLKLGTGLLESGRHYMMAECLEKFTVSLNHKLDSHAELLDATQHTLQQQIQTLVKEGLRGFREARRDFWRGAESLEAALTHNAEVAALRTARAGYRGRALDYALQINVIEDKRKFDIMEFVLRLVEAQATHFQQGHEERLSQYRKELGAQLHQLVLNSAREKRDME |
7 | 2a01A | 0.12 | 0.10 | 0.83 | 0.32 | HHpred | | -----------DEPPQSPWDRVKDLATVYVDVLKDSGRDYVSQFEGLVTSTFSKLREQLGPVTEFWDNLEKETVQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPL--GEEMRDRAR---AHVDALRTHLAPYSDELRQRLAARLEALKENGGARLATLSEKAKP--ALEDLRQ---------------- |
8 | 3s84A | 0.18 | 0.15 | 0.83 | 0.43 | MRFsearch | | --KELEELRAR----------LLPHANEVSQKIGDNLRELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVLRENLKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYALNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELG----------------------- |
9 | 3szrA2 | 0.12 | 0.11 | 0.89 | 1.06 | FFAS-3D | | LIDKVNAFNQVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQVKQQIKALEEPAVDMLHTVTDMVRLAFTDVSIKNFEEFFNLHRTAKSKIEDIRAEQEREG---------EKLIRLHFQMEQEIFQHLMAYHQEASKRISSHIPLIIQFFM--LQTYGQQLQKAMLQLLQDKD-----------TYSWLLK- |
10 | 4uosA | 0.10 | 0.08 | 0.83 | 0.88 | SPARKS-K | | ---------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVD------NEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAILKKAKEMAEKILKKVKELGVG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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