>PF14642 (255 residues) MGDQGPQDRPRSPGMDSKPWYCDKQPSKCFAKRKHRRLRFPPMDPRNRVFVTQGMDDFRY GCPSPEDTLVCRCDEFLLLKISLRGPQADPKSRKKKLRKKAALFSKLSRAKPARKTFVEG VEAQLTAKPPLAMNYNLGEDMPPDLLLQVLKPLDPERKLEDACACEGQGTTTDEPMEPGK YPCREFSPRPPETRVSCLHPEPPKSPVSSLCPEPPETGVSHLRPEPPETQVSSLHLEPPK TGVSSLLPEPPETQV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MGDQGPQDRPRSPGMDSKPWYCDKQPSKCFAKRKHRRLRFPPMDPRNRVFVTQGMDDFRYGCPSPEDTLVCRCDEFLLLKISLRGPQADPKSRKKKLRKKAALFSKLSRAKPARKTFVEGVEAQLTAKPPLAMNYNLGEDMPPDLLLQVLKPLDPERKLEDACACEGQGTTTDEPMEPGKYPCREFSPRPPETRVSCLHPEPPKSPVSSLCPEPPETGVSHLRPEPPETQVSSLHLEPPKTGVSSLLPEPPETQV | |||||||||||||||||||
1 | 2pl5A | 0.05 | 0.04 | 0.89 | 0.74 | DisCoVER | YAEFLSPVVI----AYETYGTLS-SSKNNAI--------LICHALSGDAHAAYIGFDTNQYFIICSNVIGGCKGSSGPLYGSFVSIQAGGSMGGMQALEWSISNCIVMASTAEHMQIA-FNEVGRQ--AILWNGLYDENSPRKGL-ALA--RMVGHITYLSDPRGNILSTFAVGIYQVDRFDA-NSYIYVTKALDHYSLGKGKELTLSRFLVVSY-SSDWLYPPQSIVLEDKRVFYVEL---Q--SGEGHDSFL- | |||||||||||||
2 | 5mssA | 0.06 | 0.04 | 0.74 | 0.67 | DEthreader | ESGYALVLRSAISELAVKEFIAT-IGFTSDYTSLDIAVLLLSVPLTLAPAVFRRLLVFDYDTL----ATDAGDD--SLSL----------------------LIY----TSGSTG------------RNVQFWGGIWHNAFDD--NFMPLSHVGRLMGTTTYFIAKLSFDYLARPTKTAHVDRLVPPQTILPGYYRPTTEVLGDRLKLGSYLLQAREEGL--QSYEVP---GGDSLASVSA-------------- | |||||||||||||
3 | 1xfdA | 0.07 | 0.07 | 1.00 | 0.52 | CEthreader | EVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD | |||||||||||||
4 | 6bk8T | 0.07 | 0.07 | 0.98 | 0.53 | EigenThreader | YLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFSDMEVAKLVNSFAHWEAAQSSALYQIAIEKWPSNQLLKAGLLDFEKQF------NSIEETISYKRKMEYETILSNWLYLDLISEFPKQIMQTFEKAIVDSKYLWMRYICYVELESLLEEELFQRLIDDIFSKIWLMYAKFLIRDVPKARKILGKAIGTFKGYIELEVKLEFDRVRKIYEKFIEFQDLQIWSQYGELEENWDRVRGIYTIALDE | |||||||||||||
5 | 6btmE | 0.14 | 0.05 | 0.36 | 0.27 | HHpred | -------------------------------NSAPNYQYFPNMYESVAYEPYTEAKIFKGGKLPVEGTINRGFEPYEYENSTAGYEL-----AKANL-KSPL---TEEEKGKGKELFE---IYCIS-CHGAAGNG------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 2pffB | 0.12 | 0.02 | 0.20 | 0.35 | MRFsearch | -------------------------------------------------------PDDDYGFKQ--------------------------------GSQEQGMGMDLYKTSKAAQDVWNRADNHF----------------KDTYGFSILDIV------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 2xd8A | 0.11 | 0.11 | 0.98 | 0.58 | FFAS-3D | LGRSNLSTGTGYGGADKYALYLKLFSGEMFKGFQHETIARDLVTKRT---LKNGSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAF---VYDLDETLAHYELRGESKKIGYALAEKYDRLIRVGSGTNESDAFTASALVNAFYDAAAVLNPRQYIQDIGSNGLVNRDVQGSALQSGNGVIEISMNIPFLGKYGVKYGGTTGETSPIGPTPENANATGGVNNDLGAKSCGLIFQKEAAGVVEPQVQNPAAAV | |||||||||||||
8 | 5jcss | 0.06 | 0.05 | 0.92 | 1.15 | SPARKS-K | LISTVRINEDHQKDSSNKIYNLNMIGMRIWNVEEPSEEDLTHILAQKFPILTNLIPKL------IDSYKNYMNTKFISLNKGAHTRVVSVCERLDILFKNNINKPDQLIQSSVYDSIFSEAADCFA-----GAIGEFKAL------EPIIQAIGESLDIAS----SRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVLLVGETKTTVVQQLAKMLAKKL | |||||||||||||
9 | 2vwkA | 0.08 | 0.03 | 0.34 | 0.42 | CNFpred | --------------------------------------------------------------------KFCKDFPGFIPSLLGDLEERQKVKKKMKATIDPIEKKLLDYRQRAIKILANSFYGYYGYAKARWYCKECAESVGRQYIETTIREIE----------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6rlbA | 0.03 | 0.02 | 0.70 | 0.83 | DEthreader | ----------YYLVKLKIGKRLE-EVLAIRTI-----HEKF--------KILTRVFEPTGLNAVQYKIIAEKRPTISKLMLEETARVFHSAKDLLDQLKLYEQEQFDDWSRDIQSGLSDSRSGLC----------------------L--E---LFVIPAKIQQ--N--------WDNPKELEGQKLNAARLANRRKWHTFCKVVLMNIDLLR-------------WNHQKAEHQQMEALNENLMRFIGIP-Q-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |