>PF14628 (210 residues) DTDRDKLDGRNQCGLEDLPPAPYLQYLGRYDETGLSGDLTQAKDMGAYYAVPGEISVPAS ITREQLQTVLEGGQVRVTLNELTGESRMLSLNPGQEDTPYGYLIHEAGEETAGQGYETGI RPDYNTDEYHLWQTSWDTVMKTVYKGDIYIMKGAVSGADTGLLRASQHQREIFPGPADPE TGQLICGQVTGNRLYYNSRGHFTAIYYLGD |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | DTDRDKLDGRNQCGLEDLPPAPYLQYLGRYDETGLSGDLTQAKDMGAYYAVPGEISVPASITREQLQTVLEGGQVRVTLNELTGESRMLSLNPGQEDTPYGYLIHEAGEETAGQGYETGIRPDYNTDEYHLWQTSWDTVMKTVYKGDIYIMKGAVSGADTGLLRASQHQREIFPGPADPETGQLICGQVTGNRLYYNSRGHFTAIYYLGD | |||||||||||||||||||
1 | 3i4iA | 0.04 | 0.03 | 0.73 | 0.61 | DisCoVER | FNCRAYNIEILNLSITAGAEYRTRDFGYGLYQVRMKPAK--N---PGIVSSFFTYTPWDEID---IEFLDTTKVQFNYYTNSAGNHEYIYDLRFDA-SEDFHIYAFNWQ-------PNYIAWLVDGEEVYRAYD--DIPVHPGKIMLNIWPGLGAYD--------------------------------------GKTNLTASYDWVAY- | |||||||||||||
2 | 1coyA | 0.06 | 0.04 | 0.69 | 0.67 | DEthreader | LVIGSGVEMG----WLADKTDQPVFG----------VLDSERFSGIKVYQGRGGGSGMANIDWFEWYKFARTGR------------TTA--------------YDFYMKKE------VTKSGLGGEVGNNGKKSL----KTYL-----------GNNGNIMVGIDNAPIFITKNPERATWAQSQNKGIAWGFTYHPLGDGSGNVN----- | |||||||||||||
3 | 5uamA | 0.07 | 0.07 | 0.95 | 0.48 | CEthreader | YFMSFNTKTGEWSNVEGEKLVLPVTREVADEKTMAMTGELWTFNGSTHLDAQGQPHIAINAGIDKGAKTGGPKQTRHVRWNGNEWVGGDKVIPQYERVSRGDFMVTDP------ENIRYLTTYNQDNDAVLSWWQSHDGGEHFVEDKTVLRKDNASFAISAFIKDAIPDAQMLVAEKVSDEGIKMYLVGEEGAVTRSLVDLKTAMP---- | |||||||||||||
4 | 5kcgA | 0.05 | 0.04 | 0.92 | 0.63 | EigenThreader | AFYHKYILPSLGPFRRPGVEPEYISGLSHGGHPLEISV----------KIDKSICRLGLQLDRAQCAVATTKLIVCTSLDLGEVIPKVYFSTASITPPLTGLIGVDC---IDPMLSRLKVYLATFPFGINYAMKPGTAELAP----PQIYFPLLGINDGFIADALVEFFQYMGWAKFPNVDISQTKNVHRWLGVAYSETKGPSMNIYYDV | |||||||||||||
5 | 1t6bX | 0.13 | 0.10 | 0.75 | 0.46 | HHpred | ----------NTGTAPIYNVLPTTSLVLGKNQTLAKAKLSQILAPNNYYPSKNPISTPITMNYNQFLELEKTKQLRLDTDQVYGNIATYNF--EN-----GRVRVDTG----------SNWSEVQETTARIIFNGKNLVERRIAAVN--------------PSDPLETKPDMTLKEALGFNE-------PNGNLQYQGKTEFDFNF---- | |||||||||||||
6 | 1xfuA2 | 0.10 | 0.03 | 0.33 | 0.55 | MRFsearch | ------------------------------------------------------GKIPLKLDHLRIEELKENGIILKGKKEIDNGKKYYLLESN--NQVYEFRISDE---------NNEVQYKTKEGKITVLGE---------------------------------------------------------------------------- | |||||||||||||
7 | 4adxI | 0.13 | 0.10 | 0.80 | 0.36 | FFAS-3D | ----------------------------------RRINLSGNPNLGVYISVTDSVAIPQNTPEKFEGVLREALEVEVLKVSISGSS---LNGALAVGNSNGFVVSNQAMDREERFTAVGNLVLANDNGAVASPLLSDDALQVIGDGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVANSNGVLVG------ | |||||||||||||
8 | 1j8sA | 0.14 | 0.11 | 0.80 | 0.59 | SPARKS-K | LGDVNSYQGGNVVITQRPQITS----WRPGIATVTWNQPEFADGFWAYYREYAWVVFPKKVTQ-------NGYPLFIEVHNKGSWS---EENTGDND--SYFFLKGYKWDERAFDAGNLCQK--PGEITRLTEKFDDIIFKVAYSVKIPYTSGQRHFASYRFKIPYNVAKTL-----------PRENEL----FLFKNIGG--------- | |||||||||||||
9 | 2z2pA | 0.09 | 0.06 | 0.66 | 0.83 | CNFpred | -------------------------------PYGITVSD-----KGKVWITQHKANMISCINLD-------GKITEYELPNKGAKVMCLTISS----DGEVWFTENA----------ANKIGRITKGIIKEYTLP-DSAPYGITEGDIWFTEMNGNRIGRITDDGKIREYELP--------------GSYPSFITLGSDNALWFTENQNN | |||||||||||||
10 | 6rc9A | 0.11 | 0.09 | 0.76 | 0.67 | DEthreader | RNTNIGNLFVRGWPYAFSMVNTGLKDL-------AVAGAKFVREL--VLAGTITMGDTATVPR-LLYDELE-NLLVAQ----LREDLQWPDLPIGAWPYYFHNNP---QDRPIVIYRYSGMW-----AWQVYNWDFVN-ENAYQPNSLFAAILRVSGTTTFTFVKPRAYGLQLTGLDA-----LGNVVG--------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |