>PF14621 (219 residues) PGPGQALPGALTQPQGTENREVGIGGDPGPHDKGVKRTAEVPVSEAIGQDPPAKAAKQDI EDTGSDAKRKRGRPRKKSGGSKERTSPPDKSAPAMDSAQSPRLPRETWASGGESNSAGGS GKPGPVGEAEKGMVLAQGQEDGAVSRGGRGPSSRHAKEAEDKIPLVTSKVSVIKGSRSQK EALHLVKGEVDTAAQGNKDLKGHVLQNSLFHEGKDPKAT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | PGPGQALPGALTQPQGTENREVGIGGDPGPHDKGVKRTAEVPVSEAIGQDPPAKAAKQDIEDTGSDAKRKRGRPRKKSGGSKERTSPPDKSAPAMDSAQSPRLPRETWASGGESNSAGGSGKPGPVGEAEKGMVLAQGQEDGAVSRGGRGPSSRHAKEAEDKIPLVTSKVSVIKGSRSQKEALHLVKGEVDTAAQGNKDLKGHVLQNSLFHEGKDPKAT | |||||||||||||||||||
1 | 2pffB | 0.20 | 0.11 | 0.57 | 1.17 | MRFsearch | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------------GGGGGGGGGGGG--------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGM--------GMDLYKTSKAAQDVWNRADNH------------------------------ | |||||||||||||
2 | 6em5m | 0.11 | 0.11 | 1.00 | 1.01 | SPARKS-K | RIIPPKKLKEMKEKEKIENYQYDLWGDSTETNDHVMHLRA-PKLPPPTNEESYNPPEEYLLSPEEKEAWENTEYRERNFIPQKYSALRKVPERSLDLYLAPRVRKNKLNIDPNSLIPELPSRPFPLSIDPSGLWLATGSDDGTVEENPDYHIECIEWNPDANNGILAENIHLIVPPIFGYDIENNGKTKIEDGFKPSQKQLEKDICITISCKKTVKKLS | |||||||||||||
3 | 3j4uH | 0.10 | 0.05 | 0.51 | 0.65 | DisCoVER | ---------------MIIDLQVSDGQAVTASAASTDVIRSKMV---------I--T---V--DE--------------------------S---A--D----AAGAATVTFSVQDSADNATFADVAATG-AIGKVVIPMPTKLRRYCRVYYTV-AT------GPLTAGKFSAQVVTGIQQNVAYP---------------------------------- | |||||||||||||
4 | 5l4kN | 0.07 | 0.06 | 0.85 | 0.83 | DEthreader | KPDFINQC-I-VSLMAYQICFDLYESASQQFLSLSGEMALHFLIRNNNT---------------HCGTTSDSLGHHEKEALQMATYGGLYALGLIHANHGGILGLAMGLAGLLGGIALSYVAMAYCGGFIMAGICAGTGLIAIISLQTHVVGVLVFTQPLSHLSLA-YTPTCVIGLNKMPKV-QYKSNCKPSFAPAQKVLLSIGG-------------- | |||||||||||||
5 | 2bixA1 | 0.09 | 0.09 | 0.99 | 0.54 | CEthreader | QGYVEEQKAGKMIYRGVFGSQPAGGWLKTIFDLRLKNIANTLPYLFGLRGAGECVQFHPDKPAQIILVPRDGGEIKRIPVAFEENGKQVDTDGDFRSTNFDNLDPGQLWRFTIDPAAATVEKQLMVSRCCEGAAHHSTGNAPLQAILKVDLESGTETLRSFAPHGFAGEPIFVPRPGGVAEDDGWLLCLIYKADLHRSEL--VILDAQDITAPAIATLK | |||||||||||||
6 | 3zheB | 0.06 | 0.06 | 0.92 | 0.50 | EigenThreader | TEAAPQYLRHLMKMFVADFETAVSKR------------FDVKFWNKLKSMMDEITKAMIKSKKNSRVFMAYVLLRMGDLMRYKENYPKAQEYYEQSCRINPADGAVWNQLGLISSLGAKNLESVYFHTRALHA------TMEFPTASGGLTNIFKNFANRDISRPLLEIEDSSVHLQKIGEEAAPLMSVYKHLEDGTELEQRAVEYVKTIWCTAYRSLL | |||||||||||||
7 | 6ab7A | 0.16 | 0.13 | 0.78 | 0.36 | HHpred | ------IPKEKEAPYTHKKDAWFFAANMTTSPKPI-----------FGKGLQTKRAIKDKRNLEPSEQRDFGRASKKIQESREEEKGAAKRGEWLWAMRDSKI--GDWIPMAEMP-----PCKNEMEDYAKVPIYCRGTLRGESTDCLFGIAKSHLNKDDGMYTVVTFEFS-TEEPNPSKHEKYFEAGTVPVKEKK----------------------- | |||||||||||||
8 | 2pffA1 | 0.22 | 0.12 | 0.55 | 1.05 | MRFsearch | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------------GGGGGGGGGGGG--------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVTFK-------------DKYVLITGAGKGSIGAEVLQGLLQ---------------------------- | |||||||||||||
9 | 1j5aK | 0.12 | 0.07 | 0.61 | 0.39 | FFAS-3D | --------------------------------------AQINVIGQNGGRTIELPLPEVNSGVLHEVLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARH------GDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLA-------MAIASRQEGGKLVAVDGFDI---ADAKTKNFISWAKQ------------------------------- | |||||||||||||
10 | 4nl6A | 0.10 | 0.10 | 0.97 | 1.00 | SPARKS-K | --MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGNREEQNLSDLLSPICE-VANNIEQNAQENENESQVSTDESEN----SRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |