Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LDLYAPRFVKGIGRTKMGLCPICIEGVEGEKRWFYMKTSAYNYHMQYYHGISPTTSRPFSPPTAFRTRARENPAPKERRKLVEGRCHKCRKWVACEGVKDVEVKVPEIYWWKHAAACH |
1 | 2c4iA | 0.05 | 0.05 | 0.94 | 0.61 | DisCoVER | | PTFGFTVNWK---FSESTTVFTGQCEVLKTMWLLRSSVTRVGINAVNSRGEFTLHGTQNGSTTVFTGQCFIDRNG-KEVLKTMWLLRSSVTRVGINIFTRWTNDGTFGFTV-NWK-F- |
2 | 2rdo7 | 0.05 | 0.04 | 0.88 | 0.83 | DEthreader | | GK-TTILTGNHKIGETAFWSG--M---AKQYEPHR----INIIDSMVLDGAVMTVWQAVPRI-VPLQLAI-GAEEHFTGVVDLVKLRQREIILVTCGSA--NKGVQALVIDYLPSVDV |
3 | 3v4pA | 0.07 | 0.07 | 1.00 | 0.87 | CEthreader | | HNTLFGYSVVLHNRWLLVGAPTANWLVINPGAIYRCQTCEQLQLGSPNGEPCGKTCLEERDNQWLGVTLSRQPGENGSIVTCGHRWKNIKLPTGGCYGVPPDLRTELSKRIAPCYQDY |
4 | 4ht5A | 0.06 | 0.06 | 0.99 | 0.63 | EigenThreader | | VELRSYVYLDNLQPGDASVWIRMMDIALKAAMEVHANQGEVREAGRAVLSALGLTERDRLKPSSQIIRNIDQRRGQMLETLYVLEVQPGSFGLFLGGE-ERDIIAGSRAAVAALENLS |
5 | 6ucaA | 0.21 | 0.17 | 0.81 | 0.40 | HHpred | | --------------KGEGIIMVTDPPGELPIFWFQMQV-DYDNHALYKHGK---TG-RKQSPVRIFNIPPNKIILPT-EE-GYRFCSPCQRYVSLENQNSCTSKDGRK--WNHCFLCK |
6 | 2odxA | 0.14 | 0.06 | 0.42 | 0.65 | MRFsearch | | -----PIIIESYDDYRYVGCTGS-PAGSHTIMWLKPT------------------------------------------VNEVARCWECGSVYKLNPV-------------------- |
7 | 2ysmA | 0.15 | 0.14 | 0.88 | 0.41 | FFAS-3D | | ----------GSSGSSGANCAVCDSPGDLL-DQFFCTTCGQHYHG---MCLDIAVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKKNCRICI |
8 | 5edfA2 | 0.08 | 0.08 | 0.90 | 0.77 | SPARKS-K | | ---RKDACSLSTTGERLLTYGVKKPSAYPEYEAYEDKN-------PYFHEFYYIKKGENP-AIITHRNNRINQTEEDSYSTSVGSCIN-GFTVQYYPFIREKQQLTQQELVGYHQQVE |
9 | 2xzlA | 0.19 | 0.05 | 0.26 | 0.67 | CNFpred | | ---------------------------------------------------------------------------------CVIKCNSCKKWFCNTK------GTSSSHIVNHLVLSH |
10 | 1kdgB | 0.07 | 0.07 | 0.91 | 0.83 | DEthreader | | VGAIEGPSTKVASGLTDLVGGGTSVN----GALFRAGVATYLQT-A----L-RPNFTFVILSTSVGAQDNDGFTRYTGIRWVSTVVKNLFIGIIPHLPTG-NPQGTLMSAAEQAAAKI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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