>PF14612 (227 residues) RSFKKKYAKLKVKFELGMKESESLIREELRIEDLSKRIQEQNDQLLEVLLEFNESLHVPA DQRFDISAPGDSSFLPTPERSPMYVDTATAKSTLKDAKAQMAAGSMTLEAYRTLEDDIKR GNAFAPHMHYTALQKVPHTSVPSVKQDSSTDISLEEKLGYLTPEHETEYYLSMDAKLGDE AAALELSRIPEKPSFAERERELALRNPVSVYNWLRRNQPHIFLQDHE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | RSFKKKYAKLKVKFELGMKESESLIREELRIEDLSKRIQEQNDQLLEVLLEFNESLHVPADQRFDISAPGDSSFLPTPERSPMYVDTATAKSTLKDAKAQMAAGSMTLEAYRTLEDDIKRGNAFAPHMHYTALQKVPHTSVPSVKQDSSTDISLEEKLGYLTPEHETEYYLSMDAKLGDEAAALELSRIPEKPSFAERERELALRNPVSVYNWLRRNQPHIFLQDHE | |||||||||||||||||||
1 | 5yfpC2 | 0.09 | 0.06 | 0.71 | 0.65 | DisCoVER | -----------------------------------------------------YNVALHIERLLVAELAETGCPHLLEIHFLLTSAR--DFQEQVVVMAKEAAQRTMKLFSR-LS-GI-ISKFKLLDGLTYDIVEMARAEQISLAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIDETPKVIEYPTNKGLYQ-EIMSGTIST-RTAPRGYKHFLININNIS----- | |||||||||||||
2 | 2uvcG | 0.03 | 0.02 | 0.78 | 0.67 | DEthreader | FEFERFMRGNDPYDSALFRAAAENN-VKI--Y------------IF-GG-QG-NI-EEY--FDELREIYVEDLIT-I-------ELLQSLAGLDILQWLHNPESQPDTDYLV--SAPVS--FPLIGLVQLAHY-ITC--L----------REPGELLERFSG--TT-GHSQGIVLIGSQRPTPMLSIRDLTRISLVNKVWTATVFPAHIVGRVILAGAIDGTNTEKC | |||||||||||||
3 | 6djlB | 0.11 | 0.10 | 0.94 | 0.48 | CEthreader | PRIQGELEKLNQSTDDINRRETELEDARQKFRSVLVEATVKLDELVKKIGKAVEDSKPYWEARRVARQAQLEAQKATQDFQRATEVLRAAKETISLAEQRLLEDDKRQEMLNHATQRVMEAEQTKTRSELVHKETAAR---YNAAMGRMRQLEKKLKRAINKSKPYFELKAKYYVQL--EQLKKTVDDLQAKLTLAKGEYKMALKNLEMISDEIHERR--------- | |||||||||||||
4 | 6sciA | 0.08 | 0.07 | 0.87 | 0.67 | EigenThreader | RGSLPIALDEVITDFLFNNQITSVLKAAVRKGAELANSFKAKIMWVMYEHSLCAFGGLDAVTHAMEAYVSVLASSDGQALQALKLLKEYLPASYHEGSKN-----------PVARERVHSAATIAGIAFANAFRYAEIADHLGLSAPGDRTAAKIEKLLAWLETLKAELDKLSEDAFDDQCTGAN------PRYPLISELKQILLDTYYG------------RDYVE | |||||||||||||
5 | 4bryB | 0.15 | 0.04 | 0.24 | 0.32 | HHpred | QYWKEVADQNQRALGDALVENNQLHVTLTQKQEEIASLKERNVQLKELASRTRH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1tqqA | 0.08 | 0.05 | 0.59 | 0.43 | MRFsearch | ---MSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYLNAIDVLSYTQA----------------------------------QKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLAN----------------------------------ELTARNNLDNAVEQLRQITGNYYPELAALNVTDKPQPVNALLKEAEKR--------------------- | |||||||||||||
7 | 1i49A | 0.15 | 0.10 | 0.69 | 0.76 | FFAS-3D | RTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQ---------------------KSPELQEEFGYNAETQKLLCKNGETL------LGAVNFFVSSINT----LVTKTMEDTLM--------------------------TVKQYEAARLEYDAYR---TDLEELSLGPRDAGTRGRSAQATFQAHRDKYEKLRGD---------- | |||||||||||||
8 | 5yfpE | 0.10 | 0.09 | 0.97 | 0.65 | SPARKS-K | TLFGKFTKSLIDYFQLLSTTLEQCFADLFSFGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSVDSMLKCVVESTARVMELIPNKAHLYILEILKIMFLGIVDSYMEI--ALEVAYWKICKV----DINKTAGVVNLNFLKFISMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQKMTVISTKFSKQKKKDFVPKSQ | |||||||||||||
9 | 1hciA | 0.11 | 0.08 | 0.76 | 0.67 | CNFpred | QKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDL-----------------------DMFIVHSIEEIQSLITAHEQFKA----TLPEADGERQSIMAI-----QNEVEKVIQSYNIRISSSNPYST-----------VTMDELRTKWDKVKQLVPI--RDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKM--------- | |||||||||||||
10 | 3jbrA | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | -----------------NEK-NAIGNEWPWIYFVTLILLGSFFILNLVLGVLSGEKLAVDNLAEA--LKHVVQVFIIGNIVLVTLLQFMFACIGVQLFK--NE----VEMAI-FFIIYIILIAFMIFGFVTF-Q-------WF-VMRLIKLSRAERTWTLDGGGGGG-G--GGGGGGGGGGGGGGGGGGGGGGG--GG-GGGGGGG--GG----------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |