Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | YVIVGLAALVLILFIVTIVNIVQMSKLKKKYKKFMSGKDARTLEDVLKERLDEIDDLVASNKANKKNIEDIFATLRFTFQKLGLVKYDAFNEMGGKLSFSLAMLNERNDGYIINAMHSREGCYTYIKEIIDGNSIIALSEEEKEALEMAM |
1 | 3jc8Na | 0.06 | 0.05 | 0.74 | 0.84 | DisCoVER | | -AVLDALRKGRSGPVRMMDALASATPKKVWVKTFSENNNAVSIDGS------------------AVSHDEVAEFMRGLNGVVWTPKGLVVEMLTSDATIEEFPEAQVSFFKNIDLQTAKLVEFKITMTSN-------------------- |
2 | 1yiqA1 | 0.06 | 0.05 | 0.83 | 0.83 | DEthreader | | ------DI--AN-VDGARIIAAS-TYEQYDILAELPIGKPRKVLMVILLSAKGMDMRPILDEENAAYKRNLV--P-AFW--DWQPMSYNPDTGL--VYIPAHIMSMAKSWSGKIAWDPVKQQA-WEVPYVT-------VFEG-SADGGSA |
3 | 4akrB | 0.10 | 0.10 | 1.00 | 0.61 | CEthreader | | DLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYNRDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLDDNFAAVVLMKKTQDPMRGTWDSIHVVEVKTSTVMLSIETGKVNLAGSLTRQDEKEYTF |
4 | 6tpiA | 0.05 | 0.05 | 0.89 | 0.90 | EigenThreader | | LQAYFGYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSSEKSLMSRTGGADWLQGY--------GLVVVVEHGKGDMSLYGYNQGQGRPSLYFEIRRQGQAPQPWLGR--------- |
5 | 5mc9A | 0.14 | 0.09 | 0.67 | 0.30 | HHpred | | --------------------------------------QANLLLDRLKPLKTLEENLSRNLSEIKLLISRARKQAASSADRDCIRAYQPQTSSTNYNTLILNVKTQEPDNLLFYLGSS-SSSDFLAVEMRRGKVAFLWD----------- |
6 | 3jc8Na | 0.10 | 0.07 | 0.75 | 0.57 | MRFsearch | | --AVVLIGAGVANYLWYDDRQSELEAHQAGVASTK------ARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMMDA---------KKVWVKTFSENNNAVSIDGSAV--------------------SHDEVAEFMRGL |
7 | 3jc8Na | 0.07 | 0.06 | 0.91 | 0.58 | FFAS-3D | | -FAVVLIGAGVANYLWYDDRQSELEAHQAGVAST------KARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSG-----PVRMMDALASATKVWVKTFSENNNAVSIDGSAVSHDEVAFMRGLNGVVWTPKGMGRLVDRRRDS- |
8 | 6egcA | 0.05 | 0.05 | 0.93 | 0.71 | SPARKS-K | | -TRTEIIRELERSLREQEELAKRLKELLRELERLQRGSSDEDVRELLREIKELVEEIEKLAREQKYLVEELKRELERSLREQEELAKRLKELLRELERLQREGSSDEDVRELLREIKELVEEIEKLAREQKYLVEELKRQ---------- |
9 | 3g68A | 0.14 | 0.12 | 0.87 | 0.53 | CNFpred | | AKTKGYYCTKLNLMLLGLQIAREKGII-----------SSEKYNEEINKILDAINRFEAVYKLSKQWIERNKEKLVN-SKEIRIIGHSD--IYGDTLEAALKLLETMIPVTGYEFEE-NSDSTIFILDTG----KEPRVTKMIDVLSGWT |
10 | 4f4cA | 0.10 | 0.09 | 0.85 | 1.00 | DEthreader | | ----TTTLEKLLLFIGTLVAVIGLSQFITGFIVAFHSQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVETIVVSLNKLYGPID-TSQIAI-----LFDCNIYGL------SVQVAFRVGGTGKQRIAILLLDE------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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