Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FADNTLTPREAVRLCALGTIARGPRRYSDLAASVRHFVTRITGPSLDLLGSSMELLRHEGLVEPMDGEGMEDDALLAITEGGSQEFIRLMTANLRASSDLSRLVTSLKFRFLDLLPEAQRTMQAELILETAETELARLVDLRAACREEGPLMEEWLNQEIVQAEQRLQWLESLA |
1 | 4d8mA | 0.04 | 0.03 | 0.74 | 1.00 | DEthreader | | -GLQGNLG-LFQNAIQVAIC----------------------------Q--GSTP----FDCTPC--------NPNQPCKDDLDRVASRFDTANFTVATLHLLLYEGYIEFMTFHNEQYLNNLKVELQQLIHSYSETVRTSFLQFLPYYVRNMTVCLDIAATWPTFD-THNYH- |
2 | 3ieeA | 0.06 | 0.05 | 0.80 | 1.00 | DEthreader | | -YN-SLVLKDVK-EKDVNAVLDEQKALAIVP--------------PAVV--F-RTEFYANFDTYLSLKK-----A-KLLDVNYQLSTQSEYKQNFDSKSSTQ-SILNLYAR-KHR---D-GPRIDLKVAELTKQLDAAKKL-PVV-NGHEGE-KSYQAFLSQVETFIKQVKKVR |
3 | 2rkhA | 0.58 | 0.51 | 0.89 | 4.54 | HHpred | | ----TLTPKEAVRLCALGTIASQP-RYSELAGSVRHFTSRI-GPSLEL-GISIELLRYEGLVEAVD--------ALAISAAGRRELHSLLTARLRPGSDLSKLVVALK-RFLGL-EAEERAHQIDLLIEGVDSELARLADLRGGE--GGSALAAWLDHD-ALLESRLAWLEDFR |
4 | 3l9fA | 0.15 | 0.14 | 0.93 | 0.81 | DisCoVER | | -----M----QGKDIILGILSKKERSGYEINDILQNQLSYFYDGTYGMIYPTLRKLEKDGKITKEVVIQDPNKNIYAITESGKKELASYLQSD--VNDEIFKSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWGELTPTQEITIKYGLAQYKSTKKVLEEL- |
5 | 3l9fA | 0.14 | 0.13 | 0.93 | 0.85 | MRFsearch | | ----------QGKDIILGILSKKERSGYEINDILQNQLSYFYDGTYGMIYPTLRKLEKDGKITKEVVDGRPNKNIYAITESGKKELASYLQSDV--NDEIFKSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWKKKTPTQEITIKYGLAQYKSTKKVLEEEL |
6 | 1yg2A | 0.13 | 0.11 | 0.89 | 1.44 | SPARKS-K | | ----------SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLE-------VYSITQAGRSALGEWFDQPTAHPTVRDE--FSAKLMACSVQSAEPYRLQLAELVEESRKLVAHYQEIEAAYYANQRLERLTLRRNLLVRQAWIQWADEVL |
7 | 5z7bA | 0.13 | 0.12 | 0.95 | 1.03 | MAPalign | | -------DLMTLRSALLALLSSGPLTGYDASQRFGASVGFVWSGSDSQIYPELRKMEAEELLVGSDVSKGATKTEYALSEKGWEALRKAWYEPVT--YGPTRDPARLKAAYFEVGTNGDARRHLRAHIAHFEQQKIQSESMIDELKAKTHFKVLAYEGQIARAQAEIEWAEKGL |
8 | 5z7bA | 0.13 | 0.12 | 0.96 | 0.82 | CEthreader | | -----AKDLMTLRSALLALLSSGPLTGYDASQRFGASVGFVWSGSDSQIYPELRKMEAEELLVGSDVPWGATKTEYALSEKGWEALRKAWYEPVTYGPT--RDPARLKAAYFEVGTNGDARRHLRAHIAHFEQQKIQSESMIDELKAKTHFKVLAYEGQIARAQAEIEWAEKGL |
9 | 3l9fA | 0.15 | 0.14 | 0.94 | 1.55 | MUSTER | | ---------MQGKDIILGILSKKERSGYEINDILQNQLSYFYDGTYGMIYPTLRKLEKDGKITKEVVIGRPNKNIYAITESGKKELASYLQSDVNDEIF--KSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWKELTPTQEITIKYGLAQYKSTKKVLEEEL |
10 | 1yg2A | 0.14 | 0.12 | 0.89 | 2.10 | HHsearch | | ----------SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLE-------VYSITQAGRSALGEWFDQPTAHP--TVRDEFSAKLMACSVQSAEPYRLQLAELVEESRKLVAHYQEIEAAYYKQQRLERLTLRRNLLVRQAWIQWADEVL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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