>PF14476 (318 residues) KLYAIADGVADRVEMHANIGEQRNNWNNLLLNSINAITLTAATMAGLSMIPTGTNFVLVM KITSTLLYSAATALLLVVNKIQPSQLAEEQRNASRLFRQLHEQIRTTLTLGTPTLKDVDE AMEKMLALDKAYPLPLLPGMLDKFPATVEPTRWWPAERKQRQPQQLLSKQKGMNGWNQDL EEEMRGVLGVLKRKDTADYMRLSKLVLKINRILATSGPLLTGLAALGTALAGSSSYGSWA GLVGVAGGALATIVNTFEHGGQVGMVFEMYRNCAGFYRFLEERIESNLIERDFHKRENGE MFEMKMAIELGRSIQELR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KLYAIADGVADRVEMHANIGEQRNNWNNLLLNSINAITLTAATMAGLSMIPTGTNFVLVMKITSTLLYSAATALLLVVNKIQPSQLAEEQRNASRLFRQLHEQIRTTLTLGTPTLKDVDEAMEKMLALDKAYPLPLLPGMLDKFPATVEPTRWWPAERKQRQPQQLLSKQKGMNGWNQDLEEEMRGVLGVLKRKDTADYMRLSKLVLKINRILATSGPLLTGLAALGTALAGSSSYGSWAGLVGVAGGALATIVNTFEHGGQVGMVFEMYRNCAGFYRFLEERIESNLIERDFHKRENGEMFEMKMAIELGRSIQELR | |||||||||||||||||||
1 | 3wmeA1 | 0.06 | 0.03 | 0.56 | 0.90 | DisCoVER | -----------ARRIFALAWSSSATMIVIGFIAS--IL-EGATLPAFAIVFGRMFQVYGFVGIGVFEFIVAGSRTALFGIASE--R--LA-RDL---------RVAAFSNLEQDVTYF-DRRKAGELGGKLNNDVQV--------------------------------------------------------------------IQ-YSF-SKLGAVLFNLAQCVVGIVAFLGNLLTAFFSAILGFMGVGQAAQVWPDVTRGLGA-----GG--------ELFAMIDRVP--------------------------- | |||||||||||||
2 | 4a01A | 0.05 | 0.04 | 0.70 | 0.83 | DEthreader | IQAISEGATSFLFTEYKYGIMVFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLTYGLGGSSMALFGVGGGIYTKAADVGADLGKVCAATNVIFGLALG-YKSVIIPIF------------------------------------------------------------------------AVAALMLSTITGLIDAYGPISDAGASHRIRE--RTDALDAAGNTTAAIGKGFAIGSA--MLPYWFSAMTMKSVG---------------ISSNTGGAWDNA--KKYIEA-- | |||||||||||||
3 | 5h5mA | 0.08 | 0.08 | 0.97 | 0.57 | CEthreader | DLEGHCERIVSGSASIADAESTRENRKQKIVAECNNLRQALQELLTEYEKSTGRRD--DIPLGIAEVHKRTKDLRRHLRRAIVDHISDAFLDTRTPLILLIEAAKEGHERSKMFQEHANEIVSVARLSCQLSSDVESVSVIQHTAAQLEKLAPAQAAILLCHQPTSKTAQENMETYKNAWFDKVRLLTTALDNIDCERGIKGITACETVDCAAGSIRGRALRVCDVVDAEMDFLQNSEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEMNEFINACTLVHDAVKDIRHALLMN--------- | |||||||||||||
4 | 1ciiA | 0.09 | 0.08 | 0.96 | 0.88 | EigenThreader | EITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAG------NAD-------AADITRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNNYLLSLDYKRNILNDRNPVVTVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKA | |||||||||||||
5 | 6iu3A | 0.14 | 0.09 | 0.68 | 0.30 | HHpred | -----------------------EIVRDIIIGVSDGLTVPFALAAGLSGAN--ASSSIVLTAGIAEVAAGAISMGLLAAKNYARELKREQEEIIRVPDTEAAEVAEILARYGIEPHEYGPVVNALRKKPQA----WLDFMMKF-ELGLEKP------DPK-------------RALQSAFTIAIAYVLGGLV--PLIPYMFIARKAVV--ASVILTLMALLIFGYAKGYFTDNK--PFKSALQTALIGAIASAAAFG-----MAKAV---QSENLYFQ---------------------------------------- | |||||||||||||
6 | 6thkA | 0.12 | 0.10 | 0.84 | 0.45 | MRFsearch | -LSEAVKVLRQELNKQKALKEKEDLSQLERDYRTRKANLQMKVQSELDQAGSAPTPEQWLERATRLVTQATTNNTLIKNIYNGELLVDEIASLQARLVKLNAETTRRRTE-AERKAAEEQALQDAIKFTA----DFYKEVTEKFGAR-----------------------------TSEMARQLAERQAIAKAFDSLDKQMMAKSLEKFSKGFGVVGKAIDAASLYQEFKISTEWKPFFVKIETLAAGAAASWLVGIAFATATATPIGIL------GFALVMAVTGAMIDEDLLEKANNLVISILEHHH--------- | |||||||||||||
7 | 5lm1A | 0.14 | 0.13 | 0.89 | 0.86 | FFAS-3D | -AHEASSLYSEEAKLLREMMAKIEDKNEVLDQFMDSMNLDAQLMEKCAALSVRPDTVRNLVQSMQVLSGVFTDVEASLKDIR-DLLEEDELLEQKFVRREWAKYMEVHEKASFTNSELHRAMNLHVGN-----LRLLSGPLDQVRAALPTPALSPEDKAVLQNLKRILAK------VQEMRDQRVSLEQQLRELIEEQLKKYDQLKVYLEQNLAAQDRVLCALTEANVQYAARRVLSDLDQKWNSTLQTLVASYEAYEDLKKSQEGRDFYADLESKVAALLERTQSTCQAREAARQQ--------------------- | |||||||||||||
8 | 6r9tA | 0.11 | 0.10 | 0.97 | 0.81 | SPARKS-K | AQLALIAASQSFLQPGGKMVAAAKASAMQLSQCAKNLGTALAELRTAAQKAQEACCTQDLGNSTKAVSSAIAQLLGEVAQGNENYAGIAARDVAGGLRSLAQAARGVAALTS-DPAVQAIVLDTASDVLDSSLIEEAKKAAGH--------PGDPESQQRLAQVAKAVTQVSCLPGQRDVDNALRAVGDASKRLLQEAQSRLNEAAAGLNQAATELVQAFSTFLEAGVEMAGQAPSSNLKGISMSSSKLLLAAKALSTDPAAPNLKSQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRELLENPVQPI | |||||||||||||
9 | 6vfkB | 0.10 | 0.08 | 0.82 | 0.91 | CNFpred | MIDILAESSKKSIEELARAATTEKAVAEAIEEIARLATAAIQLIEALAKNLSEEFMARAISAIAELAKKAIEAIYRLADNHTDTFMARAIAAIANLAVTAILAIAALASNH-TTEEFMARAISAIAELA---------------------------------------------------KKAIEAIYRLADNHTTDKFM-----AAAIEAIALLATLAILAIALLASNHTTEKFMARAIMAIAILAAKAIEAIYRLADNHSPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEEYKEKAKKIIDIIRKLAMAIKKLE | |||||||||||||
10 | 4av3A | 0.06 | 0.04 | 0.69 | 0.83 | DEthreader | G-DNLNIYFVPFAMTVSGYALGCSIIAMFDRVGGVYTKAADMAADLV-GK-------NP--AT-IADNVGDNVGVAGLGALLESFVGAIVSSIILASYMFPIY--VQKIGENLV--HQ-VPKETIQALISYPIFALVGLGCSMLTVVTATYFLKDLQG-----------------------------RF--SPWFSAIIGIFSGIMLSFVTSVSVDSYGPIADNAGGISEMCEL----RK-DHLDAVGNTTAAIGKGFAI-GSAIFAALSLFA---------S----------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |