Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KFGSGKGVHTAVVNVHDSDGEHTVVSCILHSGNMTEEERALGFPRSSLATHTEARAVKQIPLQQGDVMVIDGQYPPCPSCKGKMNRASTETGAKIQYTWPENGETKTWTAGQKRRRR |
1 | 5tkmA | 0.11 | 0.09 | 0.83 | 1.00 | DEthreader | | -----RSYTWLCYEVKIKRSNLLWDTGVFRGQVY-----------FKPQYHAEMCFLSWFQLADCFQITWFVSWTPCPDCVAKLAEFLSEHPVTLTISAARL---L-LSQAGARVKH |
2 | 6p3xA | 0.12 | 0.10 | 0.83 | 1.00 | DEthreader | | ---SGLDTVWLCCEVKTKDPGPLDA-KIFQGKV-----------YPKAKYHPEMRFLRWFWRDQEYKVTWYVSWSPCTRCANSVATFLAKDKVTLTIFVARIMNEQ-----HIPKLV |
3 | 5k81A | 0.14 | 0.12 | 0.86 | 1.03 | MAPalign | | --LSGLDTVWLCCEVKTKDPSGL-DAKIFQGKVY-----------PKAKYHPEMRFLRWFWRDQEYKVTWYVSWSPCTRCANSVATFLAKDKVTLTIFVARLYYFLILGATMKIM-- |
4 | 6p3xA1 | 0.13 | 0.11 | 0.84 | 1.00 | DEthreader | | ---SGLDTVWLCCEVKTKDPGPPLDAKIFQGKV----------P--KAKYHPEMRFLRWFWRDQEYKVTWYVSWSPCTRCANSVATFLAKDPVTLTIFVARL---L-LAEAGATMKN |
5 | 5k81A | 0.10 | 0.09 | 0.83 | 1.00 | DEthreader | | -----LDTVWLCCEVKTKDPGPPLDAKIFQGKVY-----------PKAKYHPEMRFLRWFWRDQEYKVTWYVSWSPCTRCANSVATFLAKDPVTLTIFVARL---L-LAEAGATMKQ |
6 | 2m65A | 0.14 | 0.12 | 0.84 | 1.00 | DEthreader | | ----GRHKTYLCYEVERLDSVKMDHRGFLHNQ-AKN-LLCGFY---G--RHAELRFLDLVLLDPIYRVTWFISWSPCSGCAGEVRAFLQENHVRLRIFAARI---L-LRDAGA---- |
7 | 2w4lE | 0.12 | 0.11 | 0.91 | 0.46 | HHpred | | -QRSKDPNSQVGACIVNSENKIVGIGYGMPNGCSDDVLNKLDT-KYPYVCHAELNAIMNKTDVKGCSMYVAL--FPCNECAKLIIQ----AGIEVIFMSDKYHDFRKFIPKCSK--- |
8 | 6u08A | 0.13 | 0.11 | 0.83 | 0.87 | DisCoVER | | ---LPAYQTVGTFYYV-NDA-GGLESKVFSSG-G---P--TPYPNYANAGHVEGQSAL--FRGISEGLVFHNNPETCGFCVNTET-LLPENAKTVVPPAIPVTGETKVFTG------ |
9 | 6l08A1 | 0.17 | 0.12 | 0.69 | 0.48 | MRFsearch | | --------FNVAVVGLGSSGRIFLGVNVEFPN-----------LPLHHSIHAEQFLVTNLTLGERHLNFFAVSAAPCGHCRQFLQEIRDAPEIKILITDP----------------- |
10 | 6u08A | 0.17 | 0.15 | 0.90 | 0.99 | SPARKS-K | | QLPAYNGQTVGTFYYVNDAGGL--ESKVFSSGGPTP------YPNYANAGHVEGQSALFRNGISEGLVFHNNPEGTCGFCVETLL----PENAKTVVPPVKRGATKVFTGNSNSPKS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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