>PF14393 (242 residues) KIFVSHRIDLESEIIDNPLYYPVRCGAVFDNKESEIPGDNTLENISEKRDTFCELTVQYW AWKNAEADYYGLCHYRRFQSFADKQFEETDIYKHVVEQQIDPEFIYRHNLNETAMRKVIE KYDVISLVPMDLNDLEKGLTVYKSLENNAYVYNMMGVDLFIKIFKETYPEYSEDIDEYFN GHIWRAFNCYILKKELFFDYSERLFNVLFQLEKKLDISKFNQEQKRLAGYMGECMFAIYY NH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KIFVSHRIDLESEIIDNPLYYPVRCGAVFDNKESEIPGDNTLENISEKRDTFCELTVQYWAWKNAEADYYGLCHYRRFQSFADKQFEETDIYKHVVEQQIDPEFIYRHNLNETAMRKVIEKYDVISLVPMDLNDLEKGLTVYKSLENNAYVYNMMGVDLFIKIFKETYPEYSEDIDEYFNGHIWRAFNCYILKKELFFDYSERLFNVLFQLEKKLDISKFNQEQKRLAGYMGECMFAIYYNH | |||||||||||||||||||
1 | 6u4bA | 0.30 | 0.29 | 0.98 | 1.50 | DEthreader | VKIYTSHHK-PSAFLNAAIIKPLHVGANSCNEIG-CPGDDTGDNISFKNPFYCELTAHYWVWKNEEADYVGFMHYRRHLNFKQTFS-EDTWGVV-NHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVT-AAGSKNNYDHYERGE-YLHIRDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIL | |||||||||||||
2 | 6u4bA | 0.30 | 0.29 | 0.98 | 1.33 | DEthreader | VKIYTSHHKPSAFL-NAAIIKPLHVGKNSCNEIG-CPGDDTGDNISFKNPFYCELTAHYWVWKNEEADYVGFMHYRRHLNFSEKQTF-SEDTWGVVN-HPCIDEYEIFGLNEETIQRCVEGIDILLPKKWSVTAAG-SKNNYDHYERGEYLH-IRDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
3 | 6u4bA1 | 0.32 | 0.32 | 0.98 | 9.34 | HHpred | KIYTSHH--KPSAFLNAAIIKPLHVGKANSCNEIGCPGDDTGDNISFKNPFYCELTAHYWVWKNELADYVGFMHYRRHLNFSEKQTFSEDTWGVVNHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVTAAG-SKNNYDHYER--GEYLHIDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
4 | 5i84A | 0.04 | 0.03 | 0.76 | 0.58 | DisCoVER | DVTGAGASFIYPVMSKWSQVNYQSIGSGGG-----IAQI------KAASVDFGS--SDA-PLKAAGLAQFPSVIGGVVPVVNVPGIAAGTLKLDGNFGNE--YVKQGIGYV--ELSYAL----KMAYTAMKN------AAGKFVQ-----PSDETFAAAANSADWGTAKDFYLVMTNAAGDNAWPITATNFILVQ-KK-------------P----K--N--PAGLKNTDYVPLPDTLV--- | |||||||||||||
5 | 6u4bA1 | 0.32 | 0.32 | 0.98 | 1.80 | MRFsearch | KIYTSHHK--PSAFLNAAIIKPLHVGKANSCNEIGCPGDDTGDNISFKNPFYCELTAHYWVWKNEEADYVGFMHYRRHLNFSEKQTFSEDTWGVVNHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVTAA-GSKNNYDHYERG-EYLHIRDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
6 | 6u4bA1 | 0.32 | 0.31 | 0.98 | 4.71 | SPARKS-K | KIYTSHH--KPSAFLNAAIIKPLHVGKANSCNEIGCPGDDTGDNISFKNPFYCELTAHYWVWKNEELDYVGFMHYRRHLNFSEKQTFSEDTWGVVNHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVTAA-GSKNNYDHYERG-EYLHIRDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
7 | 6u4bA1 | 0.32 | 0.31 | 0.98 | 2.16 | MAPalign | KIYTSHHK--PSAFLNAAIIKPLHVGKANSCNEIGCPGDDTGDNISFKNPFYCELTAHYWVWKNELADYVGFMHYRRHLNFSEKQTFSEDTWGVVNHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVTAA-GSKNNYDHYER-GEYLHIRDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
8 | 6u4bA1 | 0.32 | 0.32 | 0.98 | 2.33 | CEthreader | KIYTSHH--KPSAFLNAAIIKPLHVGKANSCNEIGCPGDDTGDNISFKNPFYCELTAHYWVWKNELADYVGFMHYRRHLNFSEKQTFSEDTWGVVNHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVTAAG-SKNNYDHYERGEY-LHIRDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
9 | 6u4bA1 | 0.32 | 0.32 | 0.98 | 3.72 | MUSTER | KIYTSHHK--PSAFLNAAIIKPLHVGKANSCNEIGCPGDDTGDNISFKNPFYCELTAHYWVWKNELADYVGFMHYRRHLNFSEKQTFSEDTWGVVNHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVTAAG-SKNNYDHYERGEY-LHIRDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
10 | 6u4bA | 0.33 | 0.32 | 0.98 | 8.29 | HHsearch | KIYTSHH--KPSAFLNAAIIKPLHVGKANSCN-EGCPGDDTGDNISFKNPFYCELTAHYWVWKNEEADYVGFMHYRRHLNFSEKQTFSEDTWGVVNHPCIDEEYEKIFGLNEETIQRCVEGIDILLPKKWSVTAAG-SKNNYDHYER--GEYLHIDYQAAIAIVEKLYPEYSTAIKTFNDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |