Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RWDLAIGFDWSAWHAALLNQPTLNRLLMVVYNTLFAQFLLAVIYFSKRDRSARIEELMLLMCATVAPTALISALWPTLGPFAVHGVGDVTYLRDVLTLRAAGPWHFESLAMQGIVPMPSFHTVLAVLFTYAFRGTGLLGYGIATLNLAMLLSIPPIGGHYLVDVLAGAALALGAIA |
1 | 6ebuA | 0.12 | 0.10 | 0.84 | 1.17 | DEthreader | | DF-ALNLELFRLINNAR--HPLLDVFFTHFAYLGSYVLFPLLIFLFIFRK-EKVKPLILAIMLETVLVISLKTFFNQPRPAILLED-----------PL-------------HWRSFPSGDTAMAFTIATVLSGEKHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
2 | 6ebuA | 0.12 | 0.10 | 0.85 | 1.17 | DEthreader | | DF-ALNLELFRLINNAR--HPLLDVFFTHFAYLGSYVLFPLLIFLFIFRK-EKVKPLILAIMLETVLVISLKTFFNQPRPAILLE----DV--------------P--L---HWRSFPSGDTAMAFTIATVLSHEKHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
3 | 6ebuA | 0.11 | 0.10 | 0.87 | 1.47 | HHpred | | --VIEFALNLFRLINN-ARHPLLDVFFTHFAYLGSGYVLFLLIFLFIFRKEKV-KPLILAIMLETVLVISLKTFFNQPRPAILLEDVNL-----------------L--FPLHWRSFPSGDTAMAFTIATVLSHGLHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
4 | 6ebuA | 0.11 | 0.09 | 0.85 | 1.71 | DisCoVER | | ----MVIENLELFIN-NRHPLLD-VFFTHFAYLGSGYVFPLLIFLFI-FRKEKVKPLILAIMLETVLVISLKTFFNQPRPAILLEDVN---L--L-------FP-------LHWRSFPSGDTAMAFTIATVLSHKLHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICG- |
5 | 6ebuA | 0.12 | 0.11 | 0.88 | 0.73 | MRFsearch | | --IEDFALNLELFRLINNAHPLLDVFFTHFAYLGSGYVLFPLLIFLFIFRKEKVKPLILAIMLETVLVISLKTFFNQPRPAILL-------------------EDVNLLFPLHWRSFPSGDTAMAFTIATVLSHGLHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
6 | 6ebuA | 0.13 | 0.11 | 0.89 | 2.12 | SPARKS-K | | -MVIEDFALNLELFRLINNHPLLDVFFTHFAYLGSGYVLFPLLIFLFIFRKEKVKPLILAIMLETVLVISLKTFFNQPRPAILLED---------------VNLLFPLHWR----SFPSGDTAMAFTIATVLSHKLHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
7 | 6ebuA | 0.12 | 0.10 | 0.87 | 1.34 | MAPalign | | -IED--FALNLELFRLINRHPLLDVFFTHFAYLGGYVLFPLLIFLFI-FRKEKVKPLILAIMLETVLVISLKTFFNQPRPAIL-------------------LEDVNLLFPLHWRSFPSGDTAMAFTIATVLSEKLHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
8 | 6ebuA | 0.12 | 0.11 | 0.89 | 1.20 | CEthreader | | -MVIEDFALNLELFRLINNHPLLDVFFTHFAYLGSGYVLFPLLIFLFIFRKEKVKPLILAIMLETVLVISLKTFFNQPRPAILLEDVNLLF-------------------PLHWRSFPSGDTAMAFTIATVLSEKLHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
9 | 6ebuA | 0.14 | 0.12 | 0.86 | 1.31 | MUSTER | | ALNLEL---FRLINNA--RHPLLDVFFTHFAYLGSGYVLFPLLIFLFIFRKEKVKPLILAIMLETVLVISLKTFFNQPRPAILLED-------------------VNLLFPLHWRSFPSGDTAMAFTIATVLSHGLHIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
10 | 6ebuA | 0.12 | 0.10 | 0.88 | 3.65 | HHsearch | | -MVIEFALNLELLIN-NARHPLLDVFFTHFAYLGSGYVLPLLIFLFIFRKEK-VKPLILAIMLETVLVISLKTFFNQPRPAILLEDVNL----------------L---FPLHWRSFPSGDTAMAFTIATVLSHGKLIKAILFLYAFLIGYERIYAGVHFPLDVFVGALIGIICGI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|