Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | IYVIDFELQPNSIKSESLFSNLQVHTFMEQAKAKSLPSLMSNAIVNDLTNKGMEAYRLPAGTPLPKNGLLVSGTFLQINEGNRLQRAIIGFGAGHTHLQVEINLSDLSRNKVSTEVYKMQIDASSGKLPGAIITPHPYAAAA |
1 | 3w1eA2 | 0.09 | 0.07 | 0.80 | 1.05 | MAPalign | | ILVGNIEVASPQQ---------------AVGQIYQVGDDFSRVVNRQLDQRSFVSGTTDYRTQIAQAQYIIGGVITDLTATV--ESQLLQDDIINRQFALE-KVFDGKT-----GHEVFNKAYREVARWPFAKTSQV----- |
2 | 2iqiF | 0.10 | 0.08 | 0.89 | 1.03 | CEthreader | | LLVAKPSAARIIDSPRVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARI----IRSDYKLAIDVRRFESDYA------GQSLPAATIELNAKLLHSSDQR------VVASRTFTVARPSSSTDTAAVAAAF |
3 | 3w1eA | 0.10 | 0.07 | 0.74 | 1.00 | DEthreader | | ILVGNIEVA--SPQQ------------AVGQI-YQVGDDFSRVVNRQLDTSRFVSGTTDYRTIAQGAQYIIGGVITDLTA-T--VESQLLDDIINRQFALE-KVFDGK----TG-HEVFNKAYREVARW------------- |
4 | 3w1eA2 | 0.11 | 0.08 | 0.73 | 1.00 | DEthreader | | ILVGNIEVA--SPQQ------------AVGQIY-QVGDDFSRVVNRQLDTSRFVSGTTDYRTIAQGAQYIIGGVITDLTA-TV--ESQ-LDDIINRQFALE-KVFDGK-----TGHEVFNKAYREV-ARW------------ |
5 | 6osxA | 0.10 | 0.08 | 0.83 | 0.35 | HHpred | | LWVEQVAVPDYLAG--N-GVVVQYVIANNNLWASPLDQQLRNTLVANLSSQLPGWVVASQPLG--SDQDTLNVTVTGFHGRYD----------GAVVISGEWLLNHQGQ---L---IKRPFHLEKDGYDEMVKVLAQGW--- |
6 | 5t10A | 0.13 | 0.10 | 0.75 | 0.83 | DisCoVER | | DKVAVVSIAN--YTETP-------------DAGHSAESIAANTLR----AGGI-ADVRIAEWARSQNARYVLSGAVEEWR--------YKVD-GEPVVGVTFELIDVSNG-----AVVWSATGTRTGWSRSGLSSVATSLI- |
7 | 5t0zA | 0.14 | 0.08 | 0.59 | 0.62 | MRFsearch | | WALLPFIN---------------------NTETPYAAERAEAVTAALLHTHGMQKLERT------KVRYAIAGTVNEWR-------YKVGLD-GEPVAGFTLQVIELP-----EEKVVWSGVAG------------------ |
8 | 5t10A | 0.14 | 0.11 | 0.77 | 0.87 | SPARKS-K | | VAVVSIANYTET---------------------PDAGHSAESIAANTLRAGGIADVRIAEWARSQNARYVLSGAVEEWRYKTGV--------DGEPVVGVTFELIDVSN---GAVVWSATGTRTGWSRSGLSSVATSLIAKV |
9 | 3w1eA | 0.09 | 0.07 | 0.80 | 1.05 | MAPalign | | ILVGNIEVASPQQ---------------AVGQIYQVGDDFSRVVNRQLDQRSFVSGTTDYRTQIAQAQYIIGGVITDLTATV--ESQLLQDDIINRQFALE-KVFDGKT-----GHEVFNKAYREVARWPFAKTSQV----- |
10 | 5ixmB | 0.08 | 0.06 | 0.73 | 0.89 | CEthreader | | LLLESSDPY----------------------------GPLARSIRQQLRLNNVTIV----DDAMRKDIPTLRIIGSSESQETVSIFRNGVAAENQLVLHVQAQVLI------PGHDIYPLQVNVFRTFFDNPLTALAKEAEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|