>PF14351 (314 residues) PWYMRIFAGIGAWFAAFMFLGFLAITNIITNEFGALVVGLGLCAVAIGINRTNQASTFLR QLALAISITGQALVLFGWTIIVESVIVAALGMIVLEIALFVAHRDFSQRLISTLGVITAI HVIAGDLNNWVESFNYMYLLLSVMIISFSLLMWFEAKIHEDQRWSSASPIAYGMLLFMAI SSLLINFNWAEFFSRGSFFILPALVGIICLGTTIWMIINEFEYKLGFIELGCIAFGLLFI AFAGINTPAIIIALLIILLSYWRGYPVMFGFGCLALIGALSLYYYNLNISLLYKSIILFG TGMMLLAIRALVLK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PWYMRIFAGIGAWFAAFMFLGFLAITNIITNEFGALVVGLGLCAVAIGINRTNQASTFLRQLALAISITGQALVLFGWTIIVESVIVAALGMIVLEIALFVAHRDFSQRLISTLGVITAIHVIAGDLNNWVESFNYMYLLLSVMIISFSLLMWFEAKIHEDQRWSSASPIAYGMLLFMAISSLLINFNWAEFFSRGSFFILPALVGIICLGTTIWMIINEFEYKLGFIELGCIAFGLLFIAFAGINTPAIIIALLIILLSYWRGYPVMFGFGCLALIGALSLYYYNLNISLLYKSIILFGTGMMLLAIRALVLK | |||||||||||||||||||
1 | 6ob6A | 0.09 | 0.09 | 0.95 | 1.24 | FFAS-3D | PWLIFFMLGLGTLLPWNFFMTATYFTNRLDMNVMTLCAMLPLLLFTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYYRYYQQSIKAILKKISVLAFSVCFIFTITIGMFPAVTVEVKSSRYFIPVSCFLTFNIWLGRSLTAVFMWPGKDSRWLPSLVLARLVFVPLLLLCDAWFIFFMAAFAFS--------NGYLASLCMCFGPEAETAGAIMAFFLCLLALGAVF--------- | |||||||||||||
2 | 6kkiA | 0.08 | 0.08 | 0.98 | 1.18 | SPARKS-K | AQSFHMQTAQVGIMLTIYAWVVALMSLPFMLMTSLLICLFVVFIASHVLSFLSWSFTVLVISRIGVAFAHAIFWSITASLAIRQALSLIATGTALAMVLGLPLGRIVGQYMTFFAIGIGALITLLCLIKLLPLLFLMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLAL--LLPAA---NSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAMALFSGIFNIGIGAGALVGNQVSLHW--SMSMIGYVGAVPAFAALIWSIIIFRRWPV | |||||||||||||
3 | 3rkoB | 0.06 | 0.05 | 0.97 | 1.62 | CNFpred | DGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLAD----NLLLMYLGWEGVGLCSYLLIGFY-AFVVTRVGDVFLAFALFILYNEL-NMLMWATLMLLGGAVGKSAWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLM--THAFFKALLFLASGSVILAC-IPLVYLCFLVGGAALSALLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGK | |||||||||||||
4 | 5y78A | 0.07 | 0.04 | 0.62 | 0.71 | DisCoVER | --KVGFYFFLWYFFNFIF------------------------------------------------------------------------------------------------------NIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWRTKPN-VSKKLIKALIWPSLGHT-LGHAATCMS------FS--LVAISFT-HVV-KSA-EPVFGAVGSGEFFHPLTYLTLVPIVSGVALSAATEFTAMISNVAFVTRNINTYALITISFFMEFYHLYNEVSYLCDN--PVTRLNFIGSTIAIIGTLYSKL- | |||||||||||||
5 | 6e8jA | 0.13 | 0.09 | 0.73 | 0.83 | DEthreader | -S-AQWGLLTGPPFALFYALMGIPIAMWAGNVFIISLCVIIWSIMTVFCGLAAS-F-IWLLLFRVGVAIGEAGCTPPANSIITAIGIYSMGVTVGGVMALFGALAGWVF--V--------------------LSGAAVAFVGYGLISFQAPFLMRVHGV--SV--SEAAIRYGAPLAAVAAFGTFLGG--SEKTPAIVPGVGLLIA--I---P--------------------------------------AYI-AAFL-TPSLTMAFWMWVIAAIAHYAYLQ-IVSLI----G--FTGMMSAFMGGIIRKNLA | |||||||||||||
6 | 3wajA | 0.09 | 0.09 | 1.00 | 0.56 | CEthreader | ESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIVPGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGQMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTALFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMFIALWGQNRFAYYFAAVSAVYSALALSVVFDKLHFRVAFALLIALAAIYPTYILADAQ | |||||||||||||
7 | 6sgwB2 | 0.13 | 0.11 | 0.80 | 0.90 | EigenThreader | PTHIARGAALALIGLILVGTGLSVAHRVITGDFIVSGIALATVIAALAV--RNRSAV----LATSLAVTALVPVAAAFALGVPGDLLAAAGVAAWSLISMAGSPDDVFTATAVTGVGVLLVAGAASLWVISSD--VIGCALVLLGLIVTVQAAQLSAMWAVLADAHQTGVIAAGVLLGVAGSVAL-------------------------------------VSSAN-----------------ASPWAWYIVVAAAAGAALRARVAWLLGHSYLLAVALLVAFVIGDRYQAALWALAALAVLVLVWIVAALNP | |||||||||||||
8 | 5tj5A | 0.12 | 0.09 | 0.74 | 0.27 | HHpred | ---------------FLMTLAALSLVEIFDGRYIILLMGVFSMYTGFLYNGTENALLFSNSYKMKLSIMGFIHMTYSYFFANHDPGLLFMQGIFGYLSVCIVYKWAVDWAPGLLNMLIN--MFLSPGTIDELQAKVQVFLLMALVCI--PWLLLVKPLHFKMIHQVIHTIEFCLN-------CVSHTASY-----LRLWALSLAHAQ--LSSVLWTTIQI-AFGFRGFVGV--FMTVALFAM--WF--ALTCAVLVLMEAMLH-SLRLHWVE------------------------------------------ | |||||||||||||
9 | 3l1lA | 0.09 | 0.09 | 0.98 | 0.42 | MRFsearch | --IPVTLMVSGAIMGSGVFLLPANLASTGIAIYGWLVTIIGALGLSMVYAKMPFLGYQTNVLYWLACWIGNIAMVVIGVGYLDPWVLTITCVVVLWIFVLLNIVQAVATVLALIPIVGIAVFGWFWFRGETYMAAIQSTLNVTLWSFIGVESASVAAGVVNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSFCAAAGCLGSLGGWTLLAGQTAKAAADGTPVAGLIIVGILMTIFQLSSILVSSVSVIFTLVPYLYTCARPAYLAVTTIAFLYCIWAVVG----SGAKEVMWSFVTLMVITAMYALNYN | |||||||||||||
10 | 4k1cA | 0.13 | 0.12 | 0.94 | 1.19 | FFAS-3D | -WDLQYIL-KASPLNFLLVFVPLGLIWGHFSHTLTFLFNFLAIIPLAAIL-----ANATEELADKANTIGGLLNATF-------GNAVELIVSIIALKVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQTAAQTMSSLLAIACASLLIPAAFRATLPFIDGKILELSRGTSIVILIVYVLFLYFQLGSHHAHHSLSVKSSLVILLGTTVIISFCADFL---VGTIDNVVTFIGLIVIPIVG-NAAEHVTSVLVLALGVAIGSSLQVALFVTPFMVLVGWMFSTFETATLFIAVFLSNEGVMSLAMYILI-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |