Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | FWPEQGWRHAQGMLDFELNQLSTHFTRSAVVQEPGRTAHWLVERSYEWIFVKSGLLDWMSNAAAQARAPSHGGTKDFRYYVSQVYVWSESYLIAAAYTTLTFIVRLLVLVLTLPLFLMAAFVGFVDGLARRDVRKFGAGRESGFVYHRAKASVMPLIVLPWVVYLALPISVHPLLILLPSAILLGVAVCITASTFK |
1 | 6thkA1 | 0.06 | 0.03 | 0.46 | 0.67 | DisCoVER | | ------------LQKNI--YY-------PV----------------------------------------------------------------------------------RSIFEQGTKEKKEINKKVVDGLLATRQERVDVMSAVLHKMESDLEG-YKKTFT-SSLIYVELERAVAYYKQDSLSEAVKVLRL- |
2 | 4mt1A2 | 0.10 | 0.08 | 0.74 | 0.83 | DEthreader | | PVTSKFVEISIEKVIHTLIEAMVLVFVVMFLTIPTIVVPISLLGGFAFISY-MGM------------------------------------SI-N-VLTMFAMILVIGIVVDDIV--EF-WTGYEGRVAKVLRKT----FRMMVVYIALVIPLGLGAGFVTVIVVPLYIAA----TVFWMLVGTLLSVFLVPLFYV |
3 | 3mktA2 | 0.11 | 0.10 | 0.93 | 0.62 | CEthreader | | -----------AALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMF--PMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIAVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLG |
4 | 1w5cJ | 0.09 | 0.08 | 0.92 | 0.68 | EigenThreader | | APAERGW-------FDILDDWLKRDRF---VFVG------WSGILLFPCAYLALGGWLTGTTFVTSWSLLLLWGPFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGNAIAFSAPIAVFVSVFLYPLGQFRFLLFFQGFHNWTFHMMGVAGVLGGALLCAIHGATVENTLFMLFVPVTGLWMSAIGVVGLA |
5 | 2vv5A | 0.12 | 0.06 | 0.46 | 0.35 | HHpred | | -----------------------------------------------------------------------------------------------------YAVN--IVAALAIIIVGLIIARMISNAVNRLMISRKID---ATVADFLSALVRYGIIAFTLALGRVGVQTASVIAVLGAALVVGLALQGSLSNLA |
6 | 3mktA2 | 0.11 | 0.10 | 0.90 | 0.35 | MRFsearch | | -------LFFEVTLFAVVALLVAPLGSTV------VAAHQVALNFSSLVFFPMSIGAAVSIRVGHKLGE--QDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYQLLLFAAIYQCMDAVQVVAAGSLRGY----KDMTAIFHRTFISYWVLGLPTGYILGMTLGAKGFWLGFIIGLSAAALMLGQRLYW- |
7 | 6cc4A2 | 0.12 | 0.11 | 0.87 | 0.92 | FFAS-3D | | ------------MFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLIFAEGAFSQAFVPILAEY--KSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAVIMVTLTSQLLKITFPYILLISLASLVGAILNTWN-------RFSIPAFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVY---- |
8 | 6w2rA | 0.14 | 0.13 | 0.93 | 0.81 | SPARKS-K | | ----GTTEDERRELEKVARKAIEAAREG-----NTDEVREQLQRALEIARESTAVKLALDVALRVAQEAKRGNKDAIDEAAEVVVRIAEEALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAAQRAIEAAKTGTVIKLAIKLAKLAARAALEVIKR-----PKSVNEALKKIVKAIQEAVESLREAEESG |
9 | 3rkoC | 0.11 | 0.10 | 0.89 | 0.96 | CNFpred | | --TQASGLVMLIAILALVFVHYNATGVWTFNYEE-GVEYLLMLGFFIAFAVKMPVHGWLPDAHSQA-----------PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT-------DIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLY |
10 | 5mrwB | 0.07 | 0.06 | 0.77 | 0.83 | DEthreader | | --WLITVLFANFAEALAEGRSKAQANKKLDMIAMVE-GAQRRKTPNEIALT-ILLIALTIVFLLATATLWSAWGGNAVS-VLALLVCLI--PTTIGGLLSAIGVAGMSRMLGANVI----LGNRQASEILSVVQKVDQVRQGA-KD-VKGGIER--IE--IQ--PLALK--------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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