>PF14320 (311 residues) EGRNVEDLSSVTSSDGTIGQRVSNTRAWAEDPDDIQLDPMVTDVVYHDHGGECTGHGPSS SPERGWSYHMSGTHDGNVRAVPDTKVLPNAPKTTVPEEVREIDLIGLEDKFASAGLNPAA VPFVPKNQSTPTEEPPVIPEYYYGSGRRGDLSKSPPRGNVNLDSIKIYTSDDEDENQLEY EDEFAKSSSEVVIDTTPEDNDSINQEEVVGDPSDQGLEHPFPLGKFPEKEETPDVRRKDS LMQDSCKRGGVPKRLPMLSEEFECSGSDDPIIQELEREGSHPGGSLRLREPPQSSGNSRN QPDRQLKTGDA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | EGRNVEDLSSVTSSDGTIGQRVSNTRAWAEDPDDIQLDPMVTDVVYHDHGGECTGHGPSSSPERGWSYHMSGTHDGNVRAVPDTKVLPNAPKTTVPEEVREIDLIGLEDKFASAGLNPAAVPFVPKNQSTPTEEPPVIPEYYYGSGRRGDLSKSPPRGNVNLDSIKIYTSDDEDENQLEYEDEFAKSSSEVVIDTTPEDNDSINQEEVVGDPSDQGLEHPFPLGKFPEKEETPDVRRKDSLMQDSCKRGGVPKRLPMLSEEFECSGSDDPIIQELEREGSHPGGSLRLREPPQSSGNSRNQPDRQLKTGDA | |||||||||||||||||||
1 | 3cosD | 0.08 | 0.07 | 0.88 | 0.45 | DisCoVER | IAWPLVEVAPPKAHEVRIQIIATSLCHTDLAFPVIVGHEAAGIKVIPLYAPLKIASDQQLMEDKTSRFTCKPVYHFFGTSTFSQYTVVSDI-NLA---K--IDDANLERVCLLGCGFSTGYGAAINNA-------KVTPGSTCAVFGLGGVGLSAVMGCKAGASRIIGIDINSKFVKAKGATDCLNIIGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAKGLLIIGRTINGTFFGG----------WKSVDIP---KLVTDYKNKKFN----LDALVTHTLPFDKISAFLMGSIRTILI------- | |||||||||||||
2 | 4m5dA | 0.06 | 0.05 | 0.77 | 0.67 | DEthreader | VLHVKVEK-L-YPDISLIGSFALKAGI-YQPN-GSS----I--D-TLLTM---------HKRSVLYSYFDNPIRSSINLLIGFPYKFPLPCITPLYNF---S-H-NYLKYLYKKKVTVLGFTMLLNKLLGFSSYQLFKGVIKYLA---TMD----------SASKYIEGFQ--T--PT-L--FDKSTKVNILKMTVSYQILKEYAGETLRLNQFSNIF--------TNISRFDLKYD-CY-VQL-LLAAFLENFAH-EMVGQKVYSNTGFNFDFVRVAQISNETI-------PGSEN-FLKVK-------- | |||||||||||||
3 | 1vt4I | 0.09 | 0.09 | 1.00 | 0.62 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 4zlhA | 0.07 | 0.05 | 0.82 | 0.53 | EigenThreader | VEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLA-------IQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVA-----ERLVKLGKDK--------------QRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAAD--------------------KNSARVSIMMGRVFMAKGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDY | |||||||||||||
5 | 2pffB | 0.17 | 0.13 | 0.74 | 0.39 | HHpred | --SYLKGATGHSQGL-VTAVAIAETDSWESFF--VSVRKAITVLFFIGV--RCYEAYPTSLPPSILSNLTQEQVQDYV--NKTNSHLPAGKQVEISLVNGAKNLVGLNLTLRKAGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLV-------PASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSISERIVDCIIR------LPVKWETTTQFKATH--ILDFGPGGASGLGVLNKDGTVAGTLDINPDDD---------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.15 | 0.04 | 0.26 | 0.63 | MRFsearch | -------------------------------------QFKATHILDFGP-----------------------------------------------------------------------------------------------------------GGASGLGVLTHRN------------------GVRVIVAGTPDDDYGFKQGGGGGGGGGGGGGGG------------------------------------MGMDLYKTSKAAQDVWNRADNH--------------------------------- | |||||||||||||
7 | 3c5bA | 0.13 | 0.12 | 0.93 | 0.40 | FFAS-3D | ---SLLDIYNRTDKNGRIARIVEQLAKTNDILTDAIYVPC-------NDGSKHKTTIRAGIPEPVWRRYNQGVQPTKTQTVPVTDTTGMYDLGFVDKALADRAFRVSENMGKLQGFNNKV------ARYSIYGNTDAEPEAFMGLAPRFNTLSTSKAASAENVFSAGGSGSTNTS------IWFMSWGENTAHMIYPEGMVAGFQHEDLGDDLVSDGNGKWDIGLSVRDWRSISRICNIDVTTLTKDASTGADLISMMVDAYYAGDGKEVIIHAWLHKQAMNAKNVNLTIEEYGGKKIVSFLGIPIRRVDA | |||||||||||||
8 | 6ybd6 | 0.10 | 0.09 | 0.93 | 0.99 | SPARKS-K | AEISEENSEGGLHVD-LAQIIEACDVCLKEDDKDVEMNSVV----------SLLLILEPDKQEALIESLCEKLVKFREGERPSLQLLSNLFHGMDK--NTPVRYTVYCSLIKVAQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRAL--------KDPNAFLFDHLLTLKPVKFLEGELIHTIFVSAQNNKDFLLHEQNMAKMMGMAVENKEISFMQQELQIGADDEAFVIDAVRTKMVYCKQTQSHSTHRTFGKQQWQQLYDTLNAW- | |||||||||||||
9 | 2l82A | 0.14 | 0.03 | 0.23 | 0.46 | CNFpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------QIFVVFSS---DPEILKEIVREIKRGVRVVLLYSDQDEKRRRERLEEFEK-------------------------------------------GVDVRTVEDKEDFRENIREIWERY-------------------------------- | |||||||||||||
10 | 2y8nA | 0.07 | 0.05 | 0.76 | 0.67 | DEthreader | AYWYNRT----------------V-ASLSHMTPNKTFPFPWVCASFFNAQAEALMNEVDAPAENSESIAKKFGMR-----------EESNSKMTGYDQFKNIMEVICMFDS-----FAIPQGEVINYYMPLQYTCHVVQSGVGLSGNTFNNLQPLSWCLGESCGFIGMPLELVMVQWKMETDVNCINFESCGTTFS------TIEEMTD---AMLNNFGFKTRESSTKYEKIFAACVALATDGRLAGT-TY-SDG-SVS---------------AA-AGTDKGIYAIFESAT--------------TEYDK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |