>PF14315 (295 residues) IQRLPLNTSAISVEVTPDIGGRILAIALPGKENFLRQGEAVISEPEPYVAPDADNVGYLA QETWLGPQSQWWTQQLVNPARAQAKAVWPPDPYLILAKNQVVQADKRRVVMRTPASPVSG VVVEKHYALVEGKPDQLHLMARATNIRDTTVAWDIWFNTRVPPSSQVYVPVASQEDVRVE HMENEQRGSLGYRLVDGFFTFVSKAHPDKPGVRGKAFIQPSAGWMAAFREGQVFIIHFPL QPTAVIHPEQGQVELYLDSIPEYPSQGLLEMEVHAPYRKLQPGAHMEAEQTWRLL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | IQRLPLNTSAISVEVTPDIGGRILAIALPGKENFLRQGEAVISEPEPYVAPDADNVGYLAQETWLGPQSQWWTQQLVNPARAQAKAVWPPDPYLILAKNQVVQADKRRVVMRTPASPVSGVVVEKHYALVEGKPDQLHLMARATNIRDTTVAWDIWFNTRVPPSSQVYVPVASQEDVRVEHMENEQRGSLGYRLVDGFFTFVSKAHPDKPGVRGKAFIQPSAGWMAAFREGQVFIIHFPLQPTAVIHPEQGQVELYLDSIPEYPSQGLLEMEVHAPYRKLQPGAHMEAEQTWRLL | |||||||||||||||||||
1 | 3ty1A | 0.13 | 0.12 | 0.88 | 1.17 | DEthreader | VKILTIHSDGLTITLSPTRG-NLLRIEGF-GSR-GWDSPVKEVVNPAFINESGWLEGFNEVRCGYEWTG-HPV---TADGQ-----IYTLHGKAGNTPALVEVEVEIRIRGLVKESTKADLQTLTELRYVPG-SNSFSLHDVLTNHADYPHDYQIIYHSNFGLEARFLAPIS---SISPFNDY---AKSGLKT-----WQTYQGPTK-D-FDE-VFNIQPLATLAAVVNKDKGASIQFDTRQ-------LPVLTLWKNTD-TVKQGYVTGIEPGTRVKQLQPGASAQFDLTYTLL | |||||||||||||
2 | 3ty1A | 0.14 | 0.12 | 0.88 | 1.17 | DEthreader | SKILTIHSDGLTITLSPTRG-NLLRIEGF-GSRGWDSPVKEVVNPAINLENGLGLEGFNEVRCGYEWTG-PVTADGQI--Y------TLHGK-AGNTPALVEVEVEIRIRGLVKESTKADLQTLTELRYVPG-SNSFSLHDVLTNHADYPHDYQIIYHSNFGTLEARFLAPI-S--SISPFND-YAKS--GLKT----WQTYQGPTK-DF-DE-VFNIQPLATLAAVVNKDKGASIQFDTR---Q-L---PVLTLWKNTDTVKQ-GYVTGIEPGTSVKQLQPGASAQFDLTYTLL | |||||||||||||
3 | 3k25A | 0.12 | 0.10 | 0.84 | 1.55 | HHpred | PLTYHLEDSLARLSLVPGRGGLVTEWTVQ-GQPILYFDRERFQDP------SLS--VRGGIILFPICGNLPQ-----D-QFNHAGKRLKQHGFARDLPWEVIGQQNARLDLRLSHAFPFAFELVFSYQLQG---HSLRIEQRIANLG-DQRPFGFHPYFFCREKLGITLAIPANDYLDQK-------TGDCHG-YDGQLNLTS-------PELDLAFTQISQPRAHFIDPNLKIEVSFSE---LYQT-----LVLWTVA-----GKDYLCLEPWSQLAWVEPYSSRSAWVNFQVS | |||||||||||||
4 | 5cd6A1 | 0.11 | 0.09 | 0.84 | 0.88 | DisCoVER | RYRISLENEKVKAIICPDLCGKVISLTHKESKEVLYRPDVIK--YTRILPRF--YFVAGGIEVSFPI---S------------------HS-PTQNEPVLYQIDHDRTYVTCGERE-SHYGQWSVEYSLGD-KDECLTQRVVYYNPGKQAY-PWSWSNAALPCAPDTQYDFP----NGTVLSHASTLDT--IDW-KTEGTHHERDI---KETGYFWKTKDVNAFGAYTPSGSGLYHIADES------T--PGIKLWSYGVDKSTPQPYVEIQGGPIKLELRPGEKKNHVEYWIP- | |||||||||||||
5 | 3k25A | 0.12 | 0.10 | 0.84 | 0.55 | MRFsearch | -LTYHLEDDLARLSLVPGRGGLVTEWTVQ-GQPILYFDRERFQ---------DPSLSVRGGIPILFPICGNLP----QDQFNHAGKSYRQHGFARDLPWEVIGQQNARLDLRLSHNFPFAFELVFSYQLQG---HSLRIEQRIANLGQRPFSLGFHPYFFCREKLGITLAIPANDYLDQK--------TGDCHGYDGQLNLTS-------PELDLAFTQISQPRAHFIDPNLKIEVSFSE--------LYQTLVLWTVAG-----KDYLCLEPWSQLAWVEPYSSRSAWVNFQVS | |||||||||||||
6 | 3nreA | 0.13 | 0.12 | 0.87 | 1.45 | SPARKS-K | GTIYTLSHGSLKLDVSD-QGGVIEGFWRDT-TPLLRPGK---KSGVATDA----------SCFPLVPFANRVSGNRFVLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYERSGVYHYRVSQAFHLTA---DTLTVTLSVTNQGAETLPFGWHPYFPLSPQTRIQAQASG--YWLERAGEFCEQLPQELDFNQPAPLP--------RQWVNNGFAGWNGQARIEQPQEGYAIIETTP--------PAPCYFIFVSDPAFDKAFDFFCLEPSHALIALAPGESTTSE-SLRVE | |||||||||||||
7 | 3imhA | 0.11 | 0.10 | 0.90 | 1.11 | MAPalign | LCEITLENAGMAVKVLNY-GATLEKVLLD-GENMILSL-NSP--------EDYSKERNFLGGTVGRIAGQWKHGNEIHQLPLNDGDNHIHGGITDMHVWDFRPSCHARVDLTLFDNDYGNLKLHARYELDNE--NNLHYLLEAVSDK--LTIFNPVNHTYFNEDLNLQMNAD----YYLPVDEAGLPDRGMAEVAGTFRTKRIGLSQIKLRNGLDHPFILNNPAALLSSNKHRLIVKTN----------APALVLYAGNFNNIGQYDGITFEAQCGQITLLPFEKFKRTVDWKFE | |||||||||||||
8 | 3imhA | 0.10 | 0.09 | 0.96 | 0.80 | CEthreader | LCEITLENDAGMAVKVLNYGATLEKVLL-DGENMILSLNSPEDYSKERNFLGGTVGRIAGRVRAGQWKHGNEIHQLPLNDGDNHIHGGIGTDMHVWDFRPSCDSEHARVDLTLFDPDGGNLKLHARYELDN--ENNLHYLLEAVSDKLTIFNPVNHTYFNLAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDRNGLDHPFILNNPAALLSSNKHRLIVKTN----------APALVLYAGNVNNIGQYDGITFEAQCPPITLLPFEKFKRTVDWKFE | |||||||||||||
9 | 3nreA | 0.15 | 0.14 | 0.91 | 1.06 | MUSTER | GTIYTLSHGSLKLDVSD-QGGVIEGFWRDT-TPLLRPG------KKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYERSGVYHYRVSQAFHLTA---DTLTVTLSVTNQGAETLPFGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELD-------NQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIETTP--------PAPCYFIFVSDPAFDKGYDFFCLEPSH-LIALAPGESTTSES-LRVE | |||||||||||||
10 | 5cd6A1 | 0.12 | 0.10 | 0.83 | 2.57 | HHsearch | YR-ISLENEKVKAIICPDLCGKVISLTHKSGKEVLYRPDVIKYT---RILPRFYF-VAGGIE-VSFPI---------------------SHSPNEPVLYQIDH-TGDRTYVTCERESHYG-QWSVEYSLGDKD-ECLTQRVVYYNPGKQAYPWWSNAALPCAPDTQYDFPNGTVLSH-ASTL--DTIDWKTEGTHH------ERD----IKE-TGYFWTKDVNAFGAYTPGSGLYHIADES--STPG-----IKLWSYGVASTPRQPYVEIQDQSIKLELRPGEKKNHVEYWIPT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |