>PF14305 (241 residues) EKLQWLKLYDRHPEYTQMVDKATVKEYVASIIGEKYIIPTLGVWENFDDIDFENIPSSFV LKCTHDSGGVVICENKNLFDVEKARSKLLKSMKKNYYYVGREYPYKDIKPRIIAEKYMVD ESHIELKDYKIHLFHGIPNFIQVDFDRFTSHHRNLYTIDWKPLGKAIKYPAVYEREIDKP IVLDEMLELAMKLAFNIPYVRADFYCIGNKVYFGELTFYHGSGFETFSPKSFDEELGALI K |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | EKLQWLKLYDRHPEYTQMVDKATVKEYVASIIGEKYIIPTLGVWENFDDIDFENIPSSFVLKCTHDSGGVVICENKNLFDVEKARSKLLKSMKKNYYYVGREYPYKDIKPRIIAEKYMVDESHIELKDYKIHLFHGIPNFIQVDFDRFTSHHRNLYTIDWKPLGKAIKYPAVYEREIDKPIVLDEMLELAMKLAFNIPYVRADFYCIGNKVYFGELTFYHGSGFETFSPKSFDEELGALIK | |||||||||||||||||||
1 | 3vmmA | 0.12 | 0.11 | 0.90 | 1.17 | DEthreader | YSFITTPMAKAVQAAENARDKNKMRDAFNKAGV--KS-IKNKRVTTLEDFRLEEIGTPLILKPTYLASIGVTLITDT-ETAEDEFNRVNDYLKSI--NVP--KAVT-FEAPFIAEEFLQGEYGYSDYISIEGIMAGEYFPIAIHDKTPQ-IGF--------TE--TS-HITPS--ILDEE-AKKKIVEAAKKANEGLQCTHTEIKLMKREPGLIESAA-RFAGWNMIPNKDMAQLLLDVLC | |||||||||||||
2 | 1ehiA | 0.14 | 0.12 | 0.88 | 1.17 | DEthreader | VALFFPQYGAPLRGHAVSFDKALTKELLTVN-GI-RNTKYIVVDPEANNWSWKELGNIVFVKAANQGVGISRVT---N-A-EEYTEALSDSFQ--Y------------DYKVLIEEAVNG-----ARELEVGVIGNPLVSEIGAHTVPNQSGDGWYDYNKFVD--NSAVHF-QIPAQLSPEVTKEVKQMALDAYKNLREARMDFLLDNNVPYLGEPNTLPGFTNMSLFKRLWINNAKLDMD | |||||||||||||
3 | 2pvpA | 0.15 | 0.13 | 0.85 | 2.03 | HHpred | EFYRIAFIGPRIEASVLSYNKYLTKLYAKDL-G-IKTLDYVLL-NEKNRANLMNFNFPFIVKPSNAGSGVNVVKEEK-----ELIYALDSAFEY--------------SKEVLIEPFIQGKE----YNLAGCKIKKDFCFSYIEEPN--K--QEFLDFKQKYLDFSK-A----PKASLSNALEEQLKENFKKLYSDGAIIRCDFFVIENEVYLNEINPIPGSLANYLFDDF-KTTLENLA- | |||||||||||||
4 | 1e4eA | 0.10 | 0.09 | 0.88 | 0.67 | DisCoVER | DVSKSHGEGCDIQSSAICMDKSLTYIVA--KA-GIATPAFWVINK-DDRPVAATFTYPVFVKPARSGSFGVKKVNS----ADELDYAIESAR-----------QY--D-SKILIEQAVSG----CEVGCAVLGNSAALVVGEVDQIRLQYGIFRIHQEVPEGSENAVITVPADLSERGRI--QETVKKIYKTLG-CRGLARVDMFLQDGRIVLNEVNTLPGFTSYRYMMAAAIDRLIVLA- | |||||||||||||
5 | 3votA | 0.10 | 0.08 | 0.83 | 0.32 | MRFsearch | ----------PFTTMENCRNKNKTRSILQQN--GLNTPVFHEFH-TLADLENRKLSYPLVVKPV---NGVVRVDD-----RKELEEAVRKVEAVNQRDL---NRFVHGKTGIVAEQFIDG----PEFAIETLSIQGNVHVLSIGYKGNS--KGPFFEEGVYIAPAQ-----------LKEETRLAIVKEVTGAVSALGPAHTELRLDKGTPYVIEVGARIGGSGVSHYINFMQLVLQNALK | |||||||||||||
6 | 3i12A | 0.14 | 0.12 | 0.86 | 1.37 | SPARKS-K | RVANLPFVGSDVLSSAACMDKDVAKRLLRDA--GLNIAPFITLTRNRHAFSFAEVGLPLFVKPANQGSGVSKVANE-----AQYQQAVALAFEFD--------------HKVVVEQGIKG------REIECAVLGNNPQASTCGEIVLNSE------FYDTKYIDDNGAQVVVPAQI-PSEVNDKIRAIAIQAYQTLGMARVDVFLTANEVVINEINTLPGFTNISMYPKLWQDLISRLIE | |||||||||||||
7 | 1bxrA | 0.10 | 0.08 | 0.83 | 0.76 | MAPalign | -LKLARALGTSPDAIDRAEDRERFQHAVERL--KLKQPANA-TVTAIEMAVAKEIGYPLVVRPSYVGRAMEIVYD-----EADLRRYFQTAV-SVS-----------NDAPVLLDHFLD-----DAVEVDVDAICVLIGGIMEHIEQAGVHSGDS--------------ACSLPAYTLSQEIQDVMRQQVQKLAFELGLMNVQFAVKNNEVYLIEVNPRAARTVPFVTGVPLAKVAARVM- | |||||||||||||
8 | 3se7A | 0.11 | 0.09 | 0.83 | 0.56 | CEthreader | ELSGIPYVGCDIQSSALCMDKSLTYLVARSA--GIATPNFWTVT-ADEKIPTDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAR-----------------EYDSKVLIEEAVI------GTEIGCAVMGNGLITGEVDQITLSGSDNSA----------------VTVPADISTTSRSLVQDTAKAVYRALGLSRVDLFLTEGKVVLNEVNTFPGMTSYSRYPRMMTAAGLSRAD | |||||||||||||
9 | 2fb9A | 0.16 | 0.14 | 0.86 | 0.98 | MUSTER | ELLGKPYVGAGVAASALCMDKDLSKRVLAQA--GVPVVPWVAVRKG--EPPVVPFDPPFFVKPANTGSGISRVE-----RFQDLEAALALAFRY--------------DEKAVVEKALSP-----VRELEVGVLGNVFGEASPVGEVRYEAP--FYDYETKYT--PGRAELLIPAPLD-PGTQETVQELALKAYKVLGMARVDFFLAEGELYLNELNTIPGFTPTSMYPRLFEAGYPELLR | |||||||||||||
10 | 2pvpA | 0.15 | 0.13 | 0.85 | 1.29 | HHsearch | EFYRIAFIGPRIEASVLSYNKYLTKLYAKDL-G-IKTLDYVLL-NEKNRALLMNFNFPFIVKPSNAGSGVNVVKEEK-----ELIYALDSAFE--------------YSKEVLIEPFIQGKE----YNLAGCKIKKDFCFSYIEEPN--K--QEFLDFKQKYLDFSK-A----PKASLSNALEEQLKENFKKLYSDGAIIRCDFFVIENEVYLNEINPIPGSLANYLFDDF-KTTLENLAQ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |