>PF14266 (498 residues) VPCYFYRYIGILDNEDEYFNSLYRLDKHLEGFNSLYIKFLNEIPLENNLDIINKTYAVWN KLSKLEKESKNNISINLLIENLINFNAFLDLKEPVINSSIIKSFYKILELFIADEKQINL SKIKNFTLKQLMWIYKYIPGLFKGFDYLKTSSSNVYNPKILYYGDIKKHEAYFLIFLSLM GCDILYINSQNDTTFSMVDKNNAFSNVTTLPNLCDIREFPKEEVLTRHETVAFKASNEIE NVIYSEEDGLFKPWQFENYKTSPLTLRATYDELKLLWNEEARIRSGFKIENGTVYIPNLF AKISGVNSDLNLYWNDLKTLKNAKDTLFIYKIPHKHDDYSNYDLYSLSYCFKNGVLHKES LLKHRLYKFSYLKTPLQNVIMDKINLLLKLPIFKNGVDEEFKLKILITILNIDKDILELI QKFDYPFNIPKIVIYHNNETLLSDSDVILLAFLNMMCFDIVIFTPTGYNDIENNINENFY DTYKLEDIKFNLNIPNLN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VPCYFYRYIGILDNEDEYFNSLYRLDKHLEGFNSLYIKFLNEIPLENNLDIINKTYAVWNKLSKLEKESKNNISINLLIENLINFNAFLDLKEPVINSSIIKSFYKILELFIADEKQINLSKIKNFTLKQLMWIYKYIPGLFKGFDYLKTSSSNVYNPKILYYGDIKKHEAYFLIFLSLMGCDILYINSQNDTTFSMVDKNNAFSNVTTLPNLCDIREFPKEEVLTRHETVAFKASNEIENVIYSEEDGLFKPWQFENYKTSPLTLRATYDELKLLWNEEARIRSGFKIENGTVYIPNLFAKISGVNSDLNLYWNDLKTLKNAKDTLFIYKIPHKHDDYSNYDLYSLSYCFKNGVLHKESLLKHRLYKFSYLKTPLQNVIMDKINLLLKLPIFKNGVDEEFKLKILITILNIDKDILELIQKFDYPFNIPKIVIYHNNETLLSDSDVILLAFLNMMCFDIVIFTPTGYNDIENNINENFYDTYKLEDIKFNLNIPNLN | |||||||||||||||||||
1 | 6jtdA | 0.08 | 0.05 | 0.57 | 0.59 | DisCoVER | KPHVFLLASPGM----GHLIPFLEL---S----KRLV-------------------------------------------------------------------------------------------------------------------TLNTLQVTLFIVFTQA-AIKDLESRIP-PAALIVDVF--SMDAFPVADRFGIKKYVFV-----------------TLNAWF----LALTTYVRIAIPGCSERLTKADGLLLNTWELEPVSLKALRENEKLNQI-MTP--PLYPVGPVARTV--------------QEVVGNECLLSTESVLYV-------------ALGSGGIISYKQMTELQRFIWVVR--------LP-TMDGACRFFPLEYLPEGFLDR---NKELGMV--L--PNWG---PQDAILAHSTGGFLSHC---G---W--NSSLESIVNVVIAWPLYAEQKM----NATLLTEELGVAVRPLPT- | |||||||||||||
2 | 2xsgA | 0.05 | 0.03 | 0.61 | 0.67 | DEthreader | --------------------------------------------DGVGGS-GGGGDLL-VP-AHPFSHDDEDAGPGFYAAATRSGLYTLSPVSQAIDQVELIRTRAEWNATLGVIGELQRLFYTHLYRMFAMPMNATSTYRGVDGAVHA-A--QGFTYYDWTWDDFRKFSVIAYIDPALYRDMVQLVWERS-VV-AD-------AKGF------LDEAYPALQETLQASWPIEKLTKGLLTADHAK-FEAAGLYQG----YHWYDAMLVAGMMFMLHSNANEID-------------LQAPYLF----NYTGEPSLTKWARAIYFVAAVGL-------------QF-QVGSPFFD----------AFTVTA----------------FYV-SATLDGAT-FGN-TW-VDYATVVGGA-----------------LAFRDWGTDTAPAF--SMSTA------------------------------------------- | |||||||||||||
3 | 2vg8A | 0.06 | 0.05 | 0.82 | 0.49 | CEthreader | --------------------------------TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTV-----------TFVIAGEGPPSAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRL----------PTALVVDLF---GTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGK-----------QEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANS---------SYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAP------QAQVLAHPSTGGFLTHCG---------WNSTLESVVSGIPLIAWPLYAKMNAVLLSEDIRAALRPRAGDDGLVRREEVA | |||||||||||||
4 | 1uaaA | 0.06 | 0.06 | 0.90 | 0.85 | EigenThreader | TGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGLDIIKREYAALGMKANDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDAAASAIGERDRIFAHCYGLYDAHLKACNDDLILLPTLLLQANWQNKIRYLLVDEYTNTSQYELVKLLVGSRARFTVVGDDDQQNLVLLSQDFPALKVIKLEQNYRSS-------------GRILKAANILIANNPHVFEKRLFSELGYGAELNNEEHEAERVTGELIAHHFVNKTQYK--------DYAILYRGNHQSRV-----FEKFLMQNRIPYKISGGTSNTPKREIGLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTL---RDM-------MEREEELDQVQLMTLHASKGL--------------EFPYVYMVGMEEGYVGITRAQKELTFTLCKERRQYGELVRPE | |||||||||||||
5 | 1vt4I | 0.12 | 0.10 | 0.82 | 0.53 | HHpred | --------AKYNVSRLQPYLKLRQALLELRP--AKNVLIDGVLGSGK--TWVA-LDVCLS------------YKVQCKMDFK--IFWLNNCNSPE---TVLEMLQKLLYQIDPNWTSRS--DHSSNIKLRIHSIQAELRRLLKSKP--------YENCLLVL---LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT----THISLDHHMTLTPLPQDLPREVLTTNPRRLSIIAESIRDG--LATWDNWKH----VNCDKLTTIIESSLNV-LEPAEYRKMFDVFPPSAHIPTILLSLIW--FDVIKSDVMLHKYS-----LVEKQPKESTISIPSIYLLKVKLENEY--ALHRSIVDHYTFDSDDLIPLDQYFYSHIGHHLKN---IEH--PERMTL---FRMVFLDFRFLEQKIRHDSTAWNASGSILDND----PKYERLVLDFLPKIEENL--IC-SKYTDLLRIALDEAIFEEAHKQV---------- | |||||||||||||
6 | 6ij7A | 0.12 | 0.06 | 0.48 | 0.38 | MRFsearch | --VLVIPF-----PQSGHMVPHLDLTHQILLRGATVTVLVT-------------------------------PKNSSYLDALRSLFKTLILGVESLQQL-------------------PLEAIVHMFDALSRLHDPLVDFLSRQ-------PPSDLPDAILGSS---FLSPWINKVADAFSIKSISFLPIN------------------------------------------------------------------------------AHSISVMWAQE-----------------------------DRSFFNDLETATTESYGLVINSFY-----------------------------------------DLEPEFVETVKTRFLHRIWTVG----------------IPPAKVSAWLDSCPEDNSVVYVGFGSQIRLTAEQTALAAALEKSSVRFIWAVPAGFEE---------------------------- | |||||||||||||
7 | 2wqdA | 0.10 | 0.08 | 0.78 | 0.71 | FFAS-3D | ------------TDVEGEVAKF--------------------------NSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLL------VLDDPELIQPIQDKITDVTTQFVTIFESMDNEYMKERAADI-RDVSKRVLSHILGVELPNPSMIDES--VVIVGNDLTPSDTASAIMSRSLEIPAIV----GTKSITQEVKQGDMIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVT------VDGVHAELAANGTPNDLPGVIENGAQYRTEFLYMGRD--------QMPTEEEQFEAYKEVLEAM--GGKRVVVRTLDIGGDKELS---------YLNLPEEMNPFLGYRAIRLSLAQQDIFRPQLRALLRASVYGKLNIMATINEFREAKAILLEEKENLKN--EGHDISDDIELGIMVE------IPATAALADVFAK-EVDFFSI---GTNDLIQYT----------------------- | |||||||||||||
8 | 5wtjA | 0.12 | 0.11 | 0.87 | 0.63 | SPARKS-K | ---------KKDKIVKFFVENIKNIEKILAEFKIDELILEKELKKGNDTEIFGIFKKHYKVNFDSKKFSKKSDEEKELYKIIYRYLILVILNESILSEKILKRVKQYTLEHLRHNDDFSRLHAKEELDLELITFFASTNELNKIFSRENINNDENID----FFGGLNSK----IKIIRDLDF----IDNKNNRKFTKIGTNERNRILHAISKERDLQGTQDDYNKVINIIQNLKISDEEVSVVFKDKKNIITKIKISEENNNDISFSKVLPEILNLYRNNPKNEPFDTI------------------ETEKIVLNALIYVNKEKKLILEDDLEENESKNIFLQELKKTLGNIDEINIIENYYKNAQISASKGNNKYQKKVIECYIGYLRKNYFDTIVINDDFEYIISIFALLNAVINKIRNRFEYQ---------------------NIIDILDEIQL-----NTLRNECIENWLNLEEFIQKKEIEKDFDDFKIQTK | |||||||||||||
9 | 5dldA | 0.08 | 0.05 | 0.62 | 0.82 | CNFpred | HMKKILLVFGTR----PEAIKMAPLVRALKARDVDAKVCVTAQ----HRQMLDQVLSLFDI------------EPDYDLDLMRQG-----QTLSDVTTGILHAIGAVFDDLR----------PDIVLVHGDTTTTLAVSLAAFY----------RYLPIGHVEAGLR-PEELNRRVTDAV-SSWHFAPTG--QARDNLLSGVPVGSVVMT----------------------------------------GNTVID--------ALHDVKHMLERDDALSREVAARFPFLDTARMVLITGHRRESFGEPFRNFCEALRTLAHRRDAQFVYPLH------------------------------------------LNPNVREPALALLGGE------------ANIYLIEPQELAFVYLMSR-------SHFIITDS--------GGIQEEGPAL-GKPVLVTRDT--TERPEAIR---------------------- | |||||||||||||
10 | 5g0iA | 0.05 | 0.03 | 0.60 | 0.67 | DEthreader | ------------------------S--KAT-----GTGLVY-VDAFTRF-------------------------------------AVT-------EDELLLVHTKEYV-LM-AEKYDSVYLHPGFFSSACLSVGSVLQLVD-KV---------MTSQLRNGFSINRPPGHNNLAIAARYAQRVLIVD--WDVHHGQGIQYIFVYFSVYIVSPEEVCMRSLLGDPPITGLVYDIPARLATELIIKSSEYT------------AQINAVAIVRPPGHHCFFNTALTARYQSITRESLRVLIVDW-------------DV-HH-GNGTQ--------------------------------------------H--FEE-DD-SVL----------------------------DANYDKVGLG-G----YNVNIPEYMAFHHLVMPIAREFAP-EL-VLVSAGVGYAHLHQLMSLAAGRVLIIMMCPPSLDHLPLKSAS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |