>PF14257 (217 residues) RKLIKTVNMDVETREYDKLLSAVENKVTELGGYIESLDAYNGSTYYSYRSTRNANLTIRI PKDRLEEFQNTVSELGNVTSRSENVQDVTLTYVDLQSHRDALRTEQERLLQLLEQAESVE DIITIEQRLSDVRYQLESMESQLRSYDNRVDYSTVYLYIDEVEVYTPVEEETVWERISTG FVDSLKNIGEGLKEAAIWFVIHIPYLVIWAIVIAVIV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | RKLIKTVNMDVETREYDKLLSAVENKVTELGGYIESLDAYNGSTYYSYRSTRNANLTIRIPKDRLEEFQNTVSELGNVTSRSENVQDVTLTYVDLQSHRDALRTEQERLLQLLEQAESVEDIITIEQRLSDVRYQLESMESQLRSYDNRVDYSTVYLYIDEVEVYTPVEEETVWERISTGFVDSLKNIGEGLKEAAIWFVIHIPYLVIWAIVIAVIV | |||||||||||||||||||
1 | 5c21A | 0.08 | 0.06 | 0.77 | 0.68 | DisCoVER | ---------MASKE-I---K--P---I----ENSIVKEIIVKEGESVRKGDVLLKLTALGAEADTLKTQSSLLQTRLEQTRYQNLDKKRAERLTILARINRYENLSRVEKSRLDDFIAKHAVLEQENKYVEAANELRVYKSQLEQIESEINERQQASVIRAPVSGKVQKVHTEGGVVTTAETLMVI--VP--E------------------------ | |||||||||||||
2 | 2j69A | 0.08 | 0.06 | 0.74 | 0.83 | DEthreader | YGR------LLHEFNLTGIRDEFQKEII-NTRD--------------------------DINAAFKELSRSASQYGSPGWLSFDKNLLFTGIGGIITAVTGILLGPIGFALLGLG-----------------KH-PQVAHEQSQVVYNAVKECFYEVRIDISRELDLVKQKQTREIN-RESEFNRLKNLQEDVIAQLQKIEAAYSNLLAYYS--H-- | |||||||||||||
3 | 2f1fA | 0.14 | 0.10 | 0.72 | 0.48 | CEthreader | ----ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPT----LSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSEEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAK-IVEVARSGVVGLSRGDKIMR---------------------------------------------------- | |||||||||||||
4 | 6bu8F | 0.09 | 0.05 | 0.55 | 0.70 | EigenThreader | -MRHYEIVFMVHSEQVPGMIERYTAAITGAEGKIHRLEDWQLYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRT----------------------------------------------------------------KHAV------------TEASPMVKAKDERRERRDDFANETADDAEA--------------------- | |||||||||||||
5 | 2f1mC | 0.11 | 0.06 | 0.56 | 0.44 | HHpred | ------------------------EVRPQVSGIILKRNFKEGS------DIEAGVSLYQIDPATYQATYDSAK----------------GDLAKAQAAANIAQLTVNRYQKLLGTYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNV------------------------------------------------- | |||||||||||||
6 | 5voxb | 0.09 | 0.07 | 0.87 | 0.62 | MRFsearch | --SVNYVTGVIARDKVATLEQILWRVLR--GNLFFKTVEI----------EQKNAFIVFSHGDLIIKRIRKIAESLDANLYDVDNEGRSQQLAKVNKNLSDLYTVLKTTSTTLESE-----LYAIAKELDSWFQDVTREKAIFEILNKSRKILIAEGWIPRD----------ELATLQARLGEMIARLGPTIVTFPFMFAIMFGHGFLMTLAALSLV | |||||||||||||
7 | 3na7A1 | 0.08 | 0.04 | 0.55 | 0.70 | FFAS-3D | -----------LIREKRKDLDKALNDKEAK-------------------------------NKAILNLEEEKL-------------ALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIK---------------------RKSEKQEDLKKEMLELEKLALEL---------------------- | |||||||||||||
8 | 1ls4A | 0.10 | 0.07 | 0.73 | 0.59 | SPARKS-K | PDAAGHVNIAEAVQQLNHTIVNAAHELHETLGL-----------PTPDEALNLLTEQANAFKTKIAEVTTSLKQEAEKHQ---------------GSVAEQLNAFARNLNNSIHDAATSDQLNSLQSALTNVGHQWQDIATKTQASAQEA--------------------WAPVQSALQEAAEKTKEAAANLQNSIQSAVQKPAN------------ | |||||||||||||
9 | 5xanA | 0.10 | 0.09 | 0.94 | 0.60 | CNFpred | -----QWVVNFKTT--DAGAKTFGDFTGKNNRLMAVVLDDQIQSVATIRLFRDIQISGNFTPEEASQLACVLKSG-KIVTAAERSIGPSLGADAIRSGAIAALVGIGLVFVMLFAYYGLWFGLVGALGLLFSS-TLPGIAGLVLTIGAAVDGNVISFERIKEE---LARGKGIKNAIGAGYEHSTAAILDVNASHLLSALALKGFAVTLIIGVIAST | |||||||||||||
10 | 3g67A | 0.08 | 0.05 | 0.59 | 0.83 | DEthreader | ------------------------------------------------E--------------------------VDQIVVKSSGLEIRSIEKLIQNIMRIARETNILALNATIEAGGKGFMIVANEVQNLSNETNEVTKQIVEKAREILESQRSNLMLF----MVFMENNVKLLQEVRNSLDTSKESLSEKSAEIDSATKVLEET--A-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |