Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RKARAIIGLCVTSQHLATIQRSKTAKEAWDSLAAIFKTKGTALKLRLRRDLSSFKMAAGEPLTKYFARAKALQDKLLESFPDFKEEDIFWPTVQGLPSTYDTILTIIENTADAELTLDSVLPKLMQVEQRQR |
1 | 6hwwA | 0.10 | 0.09 | 0.91 | 1.00 | DEthreader | | ----PTWDDCQLGGKQLPLERPDWGHLLYQLLLAGMQNAGRS-PTN-LAKVKGITQGPNESPSAFLERLKEAY-RR--PYDDGQETNVSMSFIWQSAPDIRKLERLE-DLK-S-KTLGDLVREAEKIFNKRE |
2 | 6hwwA | 0.09 | 0.08 | 0.89 | 1.00 | DEthreader | | WKNNNPSFEDPLTGEKQV-----------QLLLAGMQNAGRSP-TN-LAKVKGITQGPNESPSAFLERLKEAYRRPYDPEDPGQETNVSMSFIWQSAPDIGRKLERL-EDL-KSKTLGDLVREAEKIFNKRE |
3 | 6rwgA | 0.17 | 0.11 | 0.63 | 1.11 | HHsearch | | --------------------------------------------MYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQAS-QEVKNAATETLLVQNANPDCKTILKALGP----GATLEEMMTRVLAEAMSQV |
4 | 4hukA | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | | ---------SAF--SFIVFLIPF---YV-AAQQVGISL-SGILYMIPQSVGSAGRIFSERARYISGVSLVSGWVLAVITVGQPAD-FTQCIASYALRGYKV-TKVPMFIH-AAIAVLVWCLEKYSMELVKSH |
5 | 6gseA | 0.18 | 0.15 | 0.85 | 1.00 | DEthreader | | ---------PRE-FLSHLEELRSE-KNWVEFKKEFLQYSEGTSREAIQRELDL-PQKQGEPLDQFLWRKRDLYQTL---YVDAEEEEIIQYVVGTLQPKFKRF-LR--HP--LPKTLEQLIQRGMEVQDGLE |
6 | 6taqB | 0.14 | 0.11 | 0.82 | 1.00 | DEthreader | | FSGQRDH--V--------WWGVRA-SDALQLLRDH---T--KPSYQIYMEIFETKQSYDEVIDSFICKQRALLAKL--PEGRHDEETELDFIYGLMQPKYRESIP--RHE--V-KTFRELLDRGRTVERTR- |
7 | 6r24A | 0.11 | 0.10 | 0.92 | 0.59 | HHpred | | -SRIVYCRRHLLNPAAQWAQLEITFDTFIQGLYQHFYKPP--DINKIFNAITQLSEAKLG-IERLNQRFRKIWDRMP--PDFMTEKAAIMTYTRLLTKETYNI---VR-M-HKPETLKDAMEEAYQTTALTE |
8 | 6gseA | 0.21 | 0.18 | 0.87 | 0.74 | DisCoVER | | EYWLSQIQNHMNGPAKKWWESVKNWVEFKKE--FLQYSEGTLSREAIQRELD-LPQKQGEPLDQFLWRKRDLY-QT--LYVDAEEEEIIQYVVGTLQPKFKRFLHPLP------KTLEQLIQRGMEV----- |
9 | 6taqB | 0.20 | 0.18 | 0.91 | 0.70 | MRFsearch | | --ALKGLPLLFKSIAVVWWKGVKTWSDALQLLRDHFS--PTKPSYQIYMEIFETKQSYDEVIDSFICKQRALLAKLPE--GRHDEETELDFIYGLMQPKYRESIPRHE-----VKTFRELLDRGRTVERTR- |
10 | 5h7cA2 | 0.09 | 0.08 | 0.92 | 0.65 | SPARKS-K | | --TDKEEVIEIVKELAELAKQSTDVNEIVKQLAEVAKETDKELVIYIVKILAELAKQSTD--SELVNEIVKQLAEVAKEA---TDKELVIYIVKILSTDVNEIVKQLEEVEATD---KELVEHIEKILEELK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|