Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YFAFRIHERSNEISTIMYAKRLFQQFLVDAYTMVESSRLHYIRLNKKALRCEAYKGLSDALTRGEVQPSSQGKRIILPSSFTGVARYMIQNYQDAMAICRFVGYPNLFITFTCNPKWPEIERFLEKRNLKAEDRPDIVCRVFKMKLDCLIKEIKNGKLFGRVKKRGLPHAHILL |
1 | 2mr6A | 0.10 | 0.07 | 0.67 | 0.72 | DisCoVER | | GVVILVLTGDERIAELRKE--VQKHDPNVKT--VP--T---------KDKEKVKEEIEKARK--------QGRPIVVFV-RGG---DDERAKDIAEYAQ-KEG-LRVIVII-VSQ-------------------------DEEALR-KGYEDKKKK-GYDVYTSRNEAKKLAL- |
2 | 1h0hA | 0.06 | 0.05 | 0.86 | 0.83 | DEthreader | | ---CSV--VGSYIEHARSVA-LAEGRGAMT-HVILMMGSIHVDYTSTKC--DL----DAYCATGKPDKA-G-T-IMYAMGWT-QHTVGVQNIRAMSINQLLLNIGVNLRQGDHGIYPGYLGT-ARIYEYKFTPWSNFPKYSTFWIYTGSYMAARDKYP-WTWA------RIIYN |
3 | 1kmmC1 | 0.08 | 0.08 | 1.00 | 0.62 | CEthreader | | AIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLARANYRDALVAFLEQHPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRYNRTVF |
4 | 3boaA | 0.07 | 0.06 | 0.86 | 0.62 | EigenThreader | | DLVLAEFFA--PWCGHCKNMAPEYVKALCMEEAIVQFMPAYLANETFVTPADFNATFYSMANKHFNDYDDFKLSIYLPADIADADVFEKWLQVEASVFAQYVESGLPLGYLFYND-----------------------EEELEEYKPLFTELAKKNRGLMLNMKEQFPLFAIHD |
5 | 1vt4I | 0.15 | 0.13 | 0.83 | 0.28 | HHpred | | ------------FWTLLSQEEMVQKFV------EEVLRINYKNDNQVFARLQPYLKLRQALL-----ELRPAKNVLIDGV-LGSGKTWVALVCLSYKVQCKMDFKIFWLNLNCNSPELEMLQKLLPNWTSRSDHSSNILRIHSI--QAELRRLLKSKPYENCQNAKAWNA---- |
6 | 6v85A | 0.13 | 0.09 | 0.68 | 0.40 | MRFsearch | | ---------------LSLVDNLAFQIGYNIIALLESFVYAQLQMSDGQFHAFVCSEILDALRGT----------------NSFTQDELRTLTAELLCIMRLWGHPMLTA-------SQAAGKVRESMCAGKVLDFPTIMKTLAFFHTILINGYRRK------------------ |
7 | 2pv4A | 0.18 | 0.13 | 0.75 | 0.59 | FFAS-3D | | ----------------------YRALAQQVADKVAGRVIALDRLPESLL--TAYRSLCDELLADRDGRFTRA-WDQLPDSASSLERCVFHGFYLANAWIQLS---------IVARDISELQD--TDEAIAEQEYSGLYVRVAEAALKESVKKLKKARTDRSYNSRGI------- |
8 | 5cwbA | 0.07 | 0.06 | 0.90 | 0.58 | SPARKS-K | | EIAEEVAREISEVIRTLKESGSSYEVICECVARIVAEIVEALKRIAEIVARVISEVIRTLKESG--------------SSYEVICECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKESGSS----YEVIKECVQRIVEEIVEALKRSGTSEDEINEIVRRVKSEV |
9 | 4f9iA | 0.07 | 0.06 | 0.82 | 0.53 | CNFpred | | ----------------GSVVAILDRMRRIFKKVMELNGFLCIDMEHKEIILEVFRRLKLEYR--------PHLGIVLQAYL----KDNDKDLDDLLAWAKEH-KVQISVRLVKGAYWDYETVKAKQNDWEVP-IKAESDAAYERQARKILENHQ--ICHFACASHNIRTISAVM |
10 | 6eqoA | 0.11 | 0.10 | 0.89 | 0.83 | DEthreader | | -QPEINLPGYAFAAIGGKGIQQFKQSPPLPVRRDG-VWEDQHEATKTALIEDLLP-GA-PFYPGVTA--IPPKQ-LAFGIFGPPETHERE---LLSSGLALVLLEQAAYNLTGVSSFRLAF-FSFGLYTF--YAPQVWTRQFGTHLCN-AYEVTMNEMVLDVTE--N-ATYV-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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