Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | ARMFHAPTTQGMGAFRTLGELNSCEGDPASHFSFGLGFFFNAWASSVAAGSFTQDVDHRIIPNWGAAALMIKNRNVDETLHDPKKMAIACAVIGMIVVTFLNLTASSVPEALQVTAVKVLVPAANLLVNIVMPVIFWLAAIDAGKKSGFWATVFGGAAQLIMGNAVPGLVLGILIGKGVEESGWNHVTKVMMVAIVLLFVLSGFFRGFDMKMI |
1 | 6kkiA2 | 0.08 | 0.05 | 0.66 | 0.61 | DisCoVER | | --LFRRPALMSIYLT-VV--------------------VVT-AHY-TAYSYIFAGFALLLGGAGIIGSVIFGNQ---------YA--SALVSA-IALLLVCLALLLP-------------------AAN----SEIHLGVL-----SIFWG-IAM-MIIGLGMFIFGIGAGALVGNQVSLHWS---MS-MIGYVGAVPAFAALWSIIFWPVT- |
2 | 4av3A | 0.05 | 0.04 | 0.78 | 0.67 | DEthreader | | LLG---IAIGVALGAVMSASAGIVGVSVGGFALLGLVLVYIFGGQLNIYTNINF-----SAL-CS-IIAMFDRVGGGVYTKGDAGLGADLLESFVGAIVPIFFALVTLTYFYLKDLLDVLGFPDAGLYGVAIAAL-GM---------LSFV--SFGSAIFAALLFASYMF---------G-PPVLLA--G-KIMSVVSVIA------------ |
3 | 3k3fA | 0.11 | 0.11 | 0.99 | 0.41 | CEthreader | | CRGCGQVMFQNNTVTGLLFFAGIFYNSTTLGVCAVLGTAASTLTAQLLDKPLVRAGLFGFNGTLAGIALPFFFNYEPAMLGYVALNGAFTTIIMASLLNFLGKWGVPALTAPFVLATWLLMFGVYKLSLFHPGALIAPALPSVDMGTVTGRTFMEGLFKGVGEMFQDNIVTGVIFVVAILVNS--RISALFAVIGSLVGLCTALIMHSPETPV |
4 | 6dehA | 0.08 | 0.08 | 0.92 | 0.63 | EigenThreader | | GFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGAMVWYKKAAEQG-------NSNAALAIGYNYDTGT-GVKKDKTQALNWYAKAADLMYEQGYFEKAANQG--HAKSQLELGYLYDSGSDLQKAAFWYQKSADLGNANAQFNLADMYFYG----DGKSLEQSVYWMQKAAE--QGYGKAQNQLGIYYRDGFTAAKNNGFEKAAS |
5 | 4q65A2 | 0.10 | 0.07 | 0.72 | 0.32 | HHpred | | ---------------------------------TFFSMLFWAFAQQSSISLYIDRFVNTVPTAMFQSVFLAWVVN---RTVRIWGKFALGLGLMSAGFTLSARLLMVLGLAVMGFAELFIDPVAMSQITRIE---------VTGVLTGIYMLLSGAIANYLAG-----VIADQT----SSINAYIEVFDQITWGALACVGVVLMIWL------ |
6 | 6g9xA | 0.16 | 0.13 | 0.80 | 0.30 | MRFsearch | | ----------------TYEEAKG----DTKFWLLYLAYFCGSFAGLM-------------VIGHLAGFGRDAGLTAMAA----AGAVSSLAFSNAATRILSGWFVDKIGIRVYFAALFALQTAAMIAIFQLGVVGLSIVAIVIGWNYGAMFTLFPATCLQFYGPTAQGSNYGLLFGWLKDTTGTYYLPFLCAAALCALGTAIVFMTK------ |
7 | 6m2lA1 | 0.12 | 0.09 | 0.71 | 0.66 | FFAS-3D | | ----------------------------------CIASFIFGYQVSVLNTIKN----------FIVVEFEWCCSNNTIQSSFLLASVFIGAVLGCLIIYNFFFLVSILTSITTILFARLLSGFGIGLVTVSVPM--YISEMTHKDKKGAYGVMHQLFITF-------GIFVAVMLGLSFAKLWWRLMFLFPSVISLIGILALVVF-------- |
8 | 5y50A1 | 0.07 | 0.07 | 0.89 | 0.68 | SPARKS-K | | LSYIAGAMIAVNSSMYVLQVISILGELFLSSTAIAVSFCSVTGVFGLASAL------------ETLCGQANGAKQYEKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILDAMVAQEAGKFATWLIPALFGYATLQPLVRFFQAQSLLPLVMSSVSSLCIHIVLCSLVFK-----------FGLGSLGAAIAIGVSYWLNVTVLGLYMTFSSSCS |
9 | 5gpjA | 0.12 | 0.10 | 0.82 | 0.85 | CNFpred | | ----------------------------ATAIFSTVSFLLGGVTSLVSG-----FLGMKIATYANARTTLEARKGVGKAFIAFRSGAVMGFLLAANGLLVLYIAIN-WGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVG-RNPAVIADNVGDNVGDIAGM-AESSCAALVVASIS---SFGLNHELTAMLYPLIVSSVGILVCLLTTLF |
10 | 3ayfA | 0.06 | 0.04 | 0.75 | 0.83 | DEthreader | | -LM-YGTVLG-HGSYFNAKGYHLQLAIFWIAT-------------------------------------VL-GGSMIGQWLGVNWGHQGWEIQPDTFTMAFW----------PEVWIALGAVFSALE-VIPLTLLILEA-Q-ATFWFLISTAIWNLVGGVFGINHGHAAMGVYGMIALLYRDKLKFSCWMLNIGLAGMVVTLLPVGILQMAHG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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