Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGDYYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRRQPAYHKPVFKKLG |
1 | 2dsbA2 | 0.09 | 0.07 | 0.72 | 0.70 | DisCoVER | | -TRQTADGVAVI--PV----------LQ--RTLHYE-------CIVLVKQFRPPMGGYCIEFPAGLIDPEALELEEETG---Y-KGDIAECSPAVCTIHIVT--VT--IN-GDDAENA-------PKPKPGVEVILT- |
2 | 4l9mA | 0.09 | 0.07 | 0.76 | 0.83 | DEthreader | | LPEELSEHLTYLEFKSFRITRSIALCNGISQWVQMVVFIIQVAQK------------------LH--QLQNFNMLSSSNYDNYRRYGECTDFKAPPLEANK-DLVHLLTLS-L-DLYYTED----PVV-VDWA----- |
3 | 3nj2A | 0.09 | 0.07 | 0.80 | 0.64 | CEthreader | | WTDELVIAPYVIPKKKRREISKLRILCYFRAIAALIEKETGLLCQVVVDLNH----EGFGWALVWGGKLMVVSR----------SLRDAHR-----FGFDTLEKLNDQGTKLANAGIELVNKFPEVARL--------- |
4 | 3g1pB | 0.04 | 0.03 | 0.80 | 0.58 | EigenThreader | | G------GAQGVPA---WGCECAACARARRSDHVQGLFPLRWLQVTPLPLNHS---KLTFGYLLETAHSRVAWDTAG----LPEKTLKFLRNNQPQAPRNHCDISHQFDA----WLMENALPSG-------FEVGFDG |
5 | 5x2gA2 | 0.09 | 0.05 | 0.54 | 0.43 | HHpred | | -------------------------------AFDIGIS--SI-GWAFSEND----------E-LKDCGVRIFTKINEDKKDFLPAFNETKDEVTNPVVLRAIKEYRKVLNALLKKYGKVH------------------ |
6 | 1sc7A | 0.16 | 0.13 | 0.80 | 0.48 | MRFsearch | | --RRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLTADTVGCHINLHPELDGQEYVVEFDFLRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLM------------------------- |
7 | 2id1A | 0.20 | 0.14 | 0.67 | 0.47 | FFAS-3D | | EIQEISKLAIEALEDIKTGDSNRQVKALANSVQVKLKEAGVD-------IVGSEGHESGEWVLVDAGDVVVHVLPAVRDYYDIEAL------WGGQKPSFAVGAAK-------------------------------- |
8 | 2f5tX1 | 0.11 | 0.10 | 0.89 | 0.72 | SPARKS-K | | RSRSFDEAIEMFRESLYSAKNPSEFFETIREDLIKTLERGV--TVSLYIDKIPDLSKGKGNFFVRQFYKLNHLITDGKEVVTIQNAT---FDSIGPPFKSTYPEIIFSQYSLIIEIFKESTLEKEIIG---------- |
9 | 6u7bB | 0.12 | 0.06 | 0.46 | 0.51 | CNFpred | | MAAKVATDLRRMQRFYGY--PSDADIEAYEEELVVFLKAGYLGEVSYGFQKN-------NNWIEPTLRYTAGD----------------------------------------------------------------- |
10 | 3c9fB | 0.03 | 0.03 | 0.85 | 0.83 | DEthreader | | TWN-NFV-HT--THWYSGHIANWGDFISFTTHMRRIAHQDLLLIDLLTIGNHEYLWNSEY--------------VVNHF-QDKYVGFLGHTPGGRDFSYIDNTDSFKYHTNLDKEFDTKSK-R-KDTTIDKFSPFENI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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