Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MNYRKKPLEEVPEENTAVWSCTNDDCNGWMRDNFTFEDAPACPLCHAPMEQGMRMLPQL |
1 | 5zi6A | 0.15 | 0.14 | 0.93 | 1.27 | SPARKS-K | | --KHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIHS-- |
2 | 1dvbA2 | 0.24 | 0.19 | 0.76 | 1.12 | MUSTER | | --------RVFLREQATKWRCRN--CGYVHEGTGAPE---LCPACAHP-KAHFELLGIN |
3 | 4tpuA2 | 0.31 | 0.17 | 0.54 | 0.54 | DisCoVER | | ---------------KPVWRCKV--CGYLCAMD--E--APVCPICARRFERF-M----- |
4 | 2lcjA | 0.05 | 0.05 | 0.93 | 0.83 | DEthreader | | -TRILLYVIKAPADHLIRFEL-E-DGRSFETVDH-PEKVKVLVEQLLEINIKYVRANDD |
5 | 3axsA | 0.16 | 0.15 | 0.97 | 0.62 | CEthreader | | KERGVEKVDKLIEQFGYIQYCFN--CMNREVVTDLYKFKEKCPHCGSKFHIGPLWIGKL |
6 | 5iazA | 0.08 | 0.08 | 1.00 | 0.57 | EigenThreader | | YHPNSYGEPAPGQTISAIAFGTPLGCHSVLECIGLSPSNFPCPEVMKRVAVEAVCSTAA |
7 | 2jmoA | 0.15 | 0.14 | 0.88 | 0.30 | HHpred | | -RYQQYGAEECVLQMGGV-LCPRPGCGAGLLPEPD-QRKVTCEGCGFAFCRECKE---- |
8 | 3f9vA | 0.23 | 0.17 | 0.75 | 0.67 | MRFsearch | | -----------ERIYKATYKHIHPDCMQEFEWPEVLEMPTICPKCGKP--GQFRLIP-- |
9 | 4xlgA2 | 0.16 | 0.14 | 0.83 | 0.29 | FFAS-3D | | -QFCNKIIKHNNISENLFAFCRDTSCTFFMSEDTIIPQSPKCPKCYTLLK--------- |
10 | 1dvbA2 | 0.22 | 0.17 | 0.78 | 1.21 | SPARKS-K | | --------RVFLREQATKWRCRN--CGYVHEGTGAPEL---CPACAHPKAHFELLGINW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|