>PF14167 (232 residues) PSSVLNITKENTYPNPVQDQPTLQPSELTQSLLDTSKVKIENPDLIRMLNESSVNSTPFA FGYRAIVYLGQWPLNYESTETAPNWEYQKINTNYFDNRGGKAPYQIHYVQEAQKVVRGAL TAKIPKAQDVQNMMLLKAMEKSKLPLAFETVIGAGTKKDQVYNIPPKRLGYLYGYAPAVN EKGKVTYGEVYLMLKGSKRFLVIKNVTSQGIGAWIPVQDHISFGFMASERPR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | PSSVLNITKENTYPNPVQDQPTLQPSELTQSLLDTSKVKIENPDLIRMLNESSVNSTPFAFGYRAIVYLGQWPLNYESTETAPNWEYQKINTNYFDNRGGKAPYQIHYVQEAQKVVRGALTAKIPKAQDVQNMMLLKAMEKSKLPLAFETVIGAGTKKDQVYNIPPKRLGYLYGYAPAVNEKGKVTYGEVYLMLKGSKRFLVIKNVTSQGIGAWIPVQDHISFGFMASERPR | |||||||||||||||||||
1 | 3tu8A | 0.06 | 0.04 | 0.73 | 0.65 | DisCoVER | ------SLEQIR-----QAMKTGST--L---T---IEFLNQKS-PGTLNVFLHPAGGVRIEPAKILWLPWQTLQPGSISTVDMLFFTYYLS-G---------------------KVFAGDGGPVWHIDRMSSEWMEDWE-VGTDRQVAYLHRAGQLWNLSAYLEGYGRDNLGQAVVGGIVTGRQQMSLYQYATTSSG--SSAWSPLT------YTLQQ------R-K----- | |||||||||||||
2 | 4c3oA | 0.03 | 0.02 | 0.62 | 0.67 | DEthreader | -RIEGHMWRGLILKGRDPR---------------------------------DAWAFVERICGVCTTH-T---------------------LHAAHYEAFQVPDVLAAGSSNLLAYGE-------VDLTAPDEIQEFVTNNKGKSPRAMEVAYLYKEALGTAAALESVWAG-----------SAKGVGFSEAPR------ALGH-WIKIISYQCVVTWNAGHFDP------- | |||||||||||||
3 | 5foyA | 0.07 | 0.07 | 0.94 | 0.80 | CEthreader | ISNKEQIYLTLPSLPENEQYPKTPVLSGIDDIGPNQSEKSIIGSTLIPCIMVSDFISLGERMKTTPYYYVKHTQYWQSMWSALFPPGSKETKTEKSGITDTSQISMTDGINVSIGADFGLRFGNKT-----FGIKGGFTYDTKTQITNTSQLLIETTYTREYTNTENF--------PVRYTGYVLASEFTLHRSDGTQVNTIPWVALNDNYTTIARYPHFASEPLLGNTKII | |||||||||||||
4 | 5zu4A2 | 0.05 | 0.03 | 0.62 | 1.17 | EigenThreader | -----------------------------------------------------------AIKSSVIQDMKYPTMHQI---LPNVQMEEIKEMEYKNDT--SIVQSYTFESSKKIIKKSSWSTTNK----IESTF-------SLSEVEESEEKTETLT--FPVTVPTHKTVTVVANIGRADID--LPYTALLRITCVGASLDAPLSGI-----YKGLTYTKMTAVATES---- | |||||||||||||
5 | 2ciuA | 0.18 | 0.09 | 0.49 | 0.27 | HHpred | ------------------------DTQLFNRAV---SMVEKNKDIRSLLQCGITGKERLKAGEL--ITNDKWTRNR------------PIVSTKLD-KEGRTHHYMRFHVE-----------------------------------------------------SKKKIAL--VHLEAKESKYQPDFINMYVDVPGEKRYYLIKPKLHP-VS-------------------- | |||||||||||||
6 | 6yhsL | 0.06 | 0.02 | 0.36 | 0.43 | MRFsearch | ------------------------------------------------------------------------------------------------------------------------------KHPLVQAIENSQLKT------------------DLPEFAPGDTVVVQVKVKEGDRERLQAFEGVVIAKKNLNSAFTVRKISSVGVERVFQTHVVAKIEVKRR---- | |||||||||||||
7 | 4ae7A | 0.13 | 0.09 | 0.72 | 0.43 | FFAS-3D | --------KDYALPNAS-------WCSDMLSLYQ---------EFLEKTKSSGWIKLP----------------SFKSNRDHIRGLKLPDIFTRCIQVEGQGFEYVIFFQPTQKKSHGGSLAAM-----MDETFSKTAFLAGEGLFTLSLNI--------RFKNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHSRDQQTVYAKSS------GVFLQLQ-------LEEESPQ | |||||||||||||
8 | 4kh8A | 0.13 | 0.12 | 0.93 | 0.71 | SPARKS-K | -----------DNPNNLGDLPESVGIRQDEGLSEKDGNDLENQNLL-HAIKFDATTSFYEFGDEGTFFTARLVIISETKNYQGVYPLRTLYQDTFTYRGNDIEVFVENKANRPRTLEFEQTGQIDVNRQGDEIIGKTSFDTPQLLWNGTKVVD---KDGNDVTSANQNFISLAKFDQDSSQTGEGDYGYFKVGNQNKFRAHVSIG--TNRYGAVLELTELNRFTYTDNEGND | |||||||||||||
9 | 6ekvA | 0.12 | 0.05 | 0.42 | 0.81 | CNFpred | -------------------------------------------------------------------------------------------------------------------------------PLFIEHFLKQALLSSISVDDIVADIN-----TLTITNN-KQIIFGKVENS-KNVDSSLKPGKLKLSLQNNLIVLELFDLTWEGVTGHFDFRQEYELTLESKSEKQ | |||||||||||||
10 | 4uhwA4 | 0.04 | 0.03 | 0.68 | 0.67 | DEthreader | SRRVGAFGKV-AFRGFGFAITEITALSPEKVRIINMYKALQCWECMASYSRKVVEKFNAENYWKKKGL-AMVPLKFPVGL-R-GQA-AAL-VHIYLD------GSVLVTHIEMGQGIDIGQIEFELHIA--LL-PPSQNSNTLYSS-------------------------------KGLGES-VFLCSFADAAARERGLTLNSP--------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |