Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MKEIEVVIDTEEIAEFFYRELIRRGFVPTQTELEELADITFDYLLEKCIIDEELD |
1 | 3eyxA | 0.13 | 0.13 | 0.95 | 1.17 | DEthreader | | YNEWKNVIYL-DDIDTMYHEES-QNLITQREKSHYLSHCNVKRQFNRII-ENPVQ |
2 | 5wayA3 | 0.04 | 0.04 | 0.85 | 1.17 | DEthreader | | ----QIFKFVSDVKKELSHYLETLEVCSSSMMVNHLSYTFITHT---KHL-VLQQ |
3 | 3utkA | 0.10 | 0.05 | 0.55 | 0.59 | DisCoVER | | ------------LASLVAASK--YLRQCERSDLPDDGTILKTAV----------- |
4 | 6jqeA | 0.04 | 0.04 | 0.96 | 1.17 | DEthreader | | CEYRSMMVPWSSVLDTLRSTHR-RTLDTGTERDRALVELNVLEQVHSLR-QSAAL |
5 | 6vlsA6 | 0.04 | 0.04 | 1.00 | 0.51 | CEthreader | | KSALMFNLQEPYFTWPLIAADDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDY |
6 | 2oap21 | 0.07 | 0.07 | 1.00 | 0.58 | EigenThreader | | DEFRNVYLQDRALVRAIEKLSKEYAVSFTDNFYSYLFRDFFPIFIYHQVETNIVL |
7 | 1lvaA2 | 0.10 | 0.09 | 0.87 | 0.27 | HHpred | | -------ETQKKLLKDLEDKYRVSRWPPSFKEVAGSLEELLHYLVREGVLVKIND |
8 | 1v9nA | 0.19 | 0.15 | 0.76 | 0.42 | MRFsearch | | --ENYIRVPKDRLFSFIVRVLTKLGV--PEEDAKIVADNLVADLRG--------- |
9 | 5jm7A1 | 0.11 | 0.09 | 0.82 | 0.42 | FFAS-3D | | -------VDFATLSRLIVDKLQHQLLLPATSCETFHQRVMESHAHTQQAIDA--- |
10 | 3zh9B2 | 0.10 | 0.09 | 0.91 | 0.73 | SPARKS-K | | -----KELNAKETTDFTVNLAKTEQKTIGTEAAEHLVLLSIFQEIQKLCTFIGDR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|