>PF14132 (303 residues) SVSFYINNKKTFFKSKTPMTVKECLGFSSQKIEQFAFDETQNNFDLEKFYNSSVADYECL LCGVYGESSRGFELSFAKEFNQYVVRVFTPSTNEDWQIALTYIKDLARKLGSDIVSERGE HFTVEDIDQFNYTEDILFGIKSYFENKDTDEYISFGIFREVVINHTIVEGFLNSENPIEA FSKFFKDIQYLDAFSANQMFFEDNATKKIIGLYTLTQEVETILPYKPSVEYRNINIVKDE DISSWKLSLVIINGDPDDEESYQGAGDIEYQDFIARLSKDKYRFIDAKYILVDALTQEEI LSI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SVSFYINNKKTFFKSKTPMTVKECLGFSSQKIEQFAFDETQNNFDLEKFYNSSVADYECLLCGVYGESSRGFELSFAKEFNQYVVRVFTPSTNEDWQIALTYIKDLARKLGSDIVSERGEHFTVEDIDQFNYTEDILFGIKSYFENKDTDEYISFGIFREVVINHTIVEGFLNSENPIEAFSKFFKDIQYLDAFSANQMFFEDNATKKIIGLYTLTQEVETILPYKPSVEYRNINIVKDEDISSWKLSLVIINGDPDDEESYQGAGDIEYQDFIARLSKDKYRFIDAKYILVDALTQEEILSI | |||||||||||||||||||
1 | 1f7wA | 0.07 | 0.03 | 0.37 | 0.86 | DisCoVER | VIIMNVAAHHSELNGELLS----IQQAG---FIFG--------------------DMNIYHRHLGSGPALFSLANTFD-TPGVTIFMQVPSELQNFKLMLQSAQHIADEVGGVVLDDQRRM--MTPQKLREYQDIIREV----------------KDA------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 5mscA | 0.08 | 0.06 | 0.77 | 0.83 | DEthreader | ---RLIAAMWQRVGEVAWVALLGFTSYA-QASAQLILETSPRLLAACTTP----DPLALLIYTSGTGTPKGAMYTNR----LAATMG-S----YMPMHIAGRISL-FG---VLA------RGGTATEILVAVHGSLLQIQRPPVLDYKLLKATIG----EIFDGFYKT-IVAELEHDRLV-YV-DRRNNVLKVTVALEFASSP----LIRQIFIYGSSE------------------TDDALRLKLASI--------LQPYEIPRDFLIETEPF----A--NGLLSAKLLLKEGAQLEQMYDL | |||||||||||||
3 | 1vt4I3 | 0.05 | 0.04 | 0.95 | 0.79 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 4gczA | 0.05 | 0.04 | 0.83 | 0.67 | EigenThreader | RVGVVITDPALEDNPILGKNCRFLQ------------GKHTDPAEVDNIRTALQNKEPVTVQIQNDGTFWNELNIDPEKTYFVGIQNDI---TEHQQTQARLQELQSELVHV-------------SRLSAGEAELNQPLAAISNYAGSSDPN---------TPKVESALDRAAEQALRAGQIIRRLRDFVASEKRVESLGLAGAREQNVQLRFSLDPGADLVLQQVLVNLFRNALEAAQSQRRELVVTNTP----AADD----IEVEVSDLSISRSIIEAHGGRWATFRFTLPAAD------- | |||||||||||||
5 | 1f7wA | 0.07 | 0.03 | 0.40 | 0.44 | HHpred | VIIMNVAAHH-----GSELNGELLLNSIQQGFIFGDMNI----YH---R-HLSPDGSGPALFSLPDFTTPGVTIFMQVP--------SYGDELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQ-DIIREVKDANA---------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5mv9A | 0.12 | 0.08 | 0.63 | 0.53 | MRFsearch | ---------------------------------------------------------------------IFHKVYFPD-DTDEAFEVES------STKAKDFCQNIATRLLFSLFVKIDKVLSVPEN---DFFFDFVRHLTDWIKKARSLTYQVFF-MKKLWTKRSIVAYFNKHKSKEEAKLAFLKLIFKWPTFGSAFFEVKQTTEPNFPEILLIAI-------------------------NKYGVSLIDPK-------TKDILTTHPFTKISNWSSTYFHITIGNSKLLCETSLGYKMDDL | |||||||||||||
7 | 3ivfA | 0.15 | 0.13 | 0.84 | 0.60 | FFAS-3D | SLKISIGNVVKTMQFEPSTMVYDACRMIRERINDFGLFLSDDDPKKGIWLEAGLRNGDTMEYR---KKQRPLKIRM-LDGTVKTIMVDDSKTVTD------MLMTICARIGITLLLRRKFFYSRDDILNGSHKACEFAGFQCQIQFGPHNEQKHKAGFLDLKGERKIFQAHKNCGSEIEAKVRYVKLARSLKTY--GVSFFLVGKNKLVPRLLGITKE---------------------------CVMRVD-------EKTKEVIQEWSLTN-IKRWAASPKSFTQDGYYSVQTTEGEQIAQL | |||||||||||||
8 | 4zm6A2 | 0.07 | 0.06 | 0.89 | 0.60 | SPARKS-K | ---------APATFIVDDYRLDHVTAMWDDIFGDWPLR-----KDKINLGLQRAKLQKHKVARDGKIVGFVATQIVVVDNKKHGQLMLLMVSPSYGTLLHDAALEHFREQGADCIKLGSTYPRF-FPGVPDDDAQSRKAQAFFSKKDDNLVHDLIGDLWFGRIKPSETWELYAFQRNFPHWLSTYQHHVELGDYQDLIVARQDDENGRVIASLILNTYRSDLIWTDDKLFGE----------RSGGMACVGVAQEERG----RGIGIGIVAHANWLLKQRGVTK-----SYVDWVELDFYSRV | |||||||||||||
9 | 6asyA | 0.13 | 0.11 | 0.84 | 0.63 | CNFpred | HAVVTVPA---YFNDAQRQATKDAGTIA--GLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDN--GVFEVVATNG-EDFDQRVMEHFIKLYKKKTGKDVR-DFSETLTRAKFEELNLFRSTMKPVQKVLEDSDIDEIVLVGGSTRIPKIQQLVKEFFN-INPDEAVAYGAAVQAGVLS-TGDLVLLDVC--PLTLGIETVG-VMTKLIPRNTVVPTKKSQIFS--VGGTVTIKVYEGER--PLTKDNHLLGTFDLTG------------------------------- | |||||||||||||
10 | 5mqmA | 0.05 | 0.04 | 0.73 | 0.67 | DEthreader | QKIVW-ADVFTCRN-IEIAHRLKV-VKQL--VPARQGWQ---GSEDMDAAKWKPNLKI-----------------KELRLHRDQWEGKAG----WR-VA-SSTKKEEIG-QDCYPLLA-GIPMAERSEKILRDVRTTIGELVVDVYQVLAFAECVAPTMGLHYQKVDL--------------LDAISGAHI-AEGFTEGTWN------EHPILKALDRALGIRLFFHVYTLDGIGLF-QRDQTWWN-G------------------AKAFCEYITRCQSLLQYG-------AWTFIANNESVF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |