Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | HLWIGTNHMPLDEFNQYFELDYTEELGSPEYKVCGFCKDTGNNWYDEDFVGYPEPLKEEVDIATLVDQLIAPDLDCKNQIVQACNKLGITKANAVIWYTAESKYDSEFKLQKPYKDSYNGLKYIGVFKF |
1 | 5a8sA | 0.06 | 0.05 | 0.74 | 0.74 | DisCoVER | | RVVVFAQYPS--GR--Y------------------K--AFDYV-FP-DYLKVFLNWRELMGVIVSFNGNIDARKAGH-LS--RA--VYVPLNTVKVLATARQTLNNIVCPNVIEF--NTEVIAYISSD- |
2 | 4w8wA | 0.07 | 0.06 | 0.89 | 1.00 | DEthreader | | YLVGLYTTPTHPGIQVIWGQS-----------KGVLRSYLKKIFGGISVGDAKILFFPYVT-VLRFKRDLLAGVKNFQKAIQAFGNEMAIDTLFYSLILVT-PRADMIKLGKNGKYLQFVKVTLKEVT- |
3 | 5fxdA2 | 0.06 | 0.05 | 0.88 | 0.56 | CEthreader | | SQSFLITFDKEEDLEQIVD---------------IMLPLRINMAPLQNVPVLRNIFMDAAAVSKRTEWFDGDGPMPAEAIERMKKDLDLGFWNFYGTLYGPPPLEMYYGMIKEAFGKIPGARFFTHEER |
4 | 3bbnJ | 0.03 | 0.02 | 0.68 | 0.67 | EigenThreader | | IRIKLSYWV--PLIEDSC---------------KQIMDA--ARTTNAKTMGPVPLPTKKRIV-------LKSPH-VHKDAR-------FHTHQRLIDIL----YPTAQTIDSLMQLDAGVDVEVKL--- |
5 | 3k1tA2 | 0.12 | 0.09 | 0.76 | 0.26 | HHpred | | -----------SQWQEYGAPFYASGFDTNDRVVEEFAPLIDIDWLNPYFDTCGGLDHARLGEEQLAEKV----DSLLAKIRRKYAEYGVKQEPFVIVKADAG------TYG--GITSADDV-------- |
6 | 3k1tA | 0.13 | 0.07 | 0.54 | 0.48 | MRFsearch | | ----------SNHFTAYDR------------VVEEFAPLIDIDP---WLLNPYFDTHARLGEEQLAEK----VDSLLAKIRRKYAEYGVKQEPFVIVKA------------------------------ |
7 | 1y2iA | 0.12 | 0.08 | 0.63 | 0.40 | FFAS-3D | | -VVTGEAILGANIFRDFFAGIRDIVGG------------------------------RSGAYEKELRKA---REIAFEELGSQARALG---ADAVVGIDIDY---------ETVGQNGSLVSVSGTA-- |
8 | 2l82A | 0.07 | 0.06 | 0.90 | 0.67 | SPARKS-K | | SQIFVVFSSDPEILKEIVRELYSDQDEKRRRERLEEFEKQGV---------DVRTVEDKEDFRENIREITTDDKEWIKDFIEEAKERGVE----VFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSDKEE |
9 | 1itxA | 0.12 | 0.11 | 0.94 | 0.54 | CNFpred | | KTIISVGGTWSNRFSDVAAT--AATREVFANSAVDFLRKYNFDGVDLDWEYPVSGGLDGNSKREDKQNYTLLLSKIREKLDAAGAVDGK-KYLLTIASGASATYAANTELAK-----AAIVDWINIMTY |
10 | 4w8wA | 0.10 | 0.09 | 0.88 | 1.00 | DEthreader | | YLVGLYTPTHPGIIW--GQS------------KGVLRSYLVKIFGGLISVGDAKILFFVTS-VLRFKRDLELGVKNFQKAIQAFGNEMAIDTLFYSLILVTAKDNDMIKLGKNGKYLQIVKVTLKEV-T |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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