Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ATNRLSLIARPLNPKVQNLNSVVVALPRSWRLTTQVHGRVLDATYVQFLFVNEIDLMRVQRRELWLFNNWFVAATRWEVALAHNFVTTIDLWVQIRGIPLPYISEETVLEIAQDLGEIISLDFHEATSPQIAYIRVRV |
1 | 3h2uB | 0.07 | 0.06 | 0.83 | 1.00 | DEthreader | | LQPTDALLCVANLPPSLTQQQFEELVR---PF-GSLRCFLVYSKYGFAEYMKKDSAARAKSDLLGKPLGRLYVHWTDAGQLTALLSRCLCVDRLPP------GFN--DVDALCRLFCQLACG-----------KGFAV |
2 | 4n0tA | 0.07 | 0.07 | 0.93 | 1.00 | DEthreader | | HLTECTLWMTNF--PPSYTQRNIRDLLQDINV-VALSIRLPSRRFAYIDVTSKEDARYCVEKNGLKIEGYTLVTKVSN--P-LEKSKRTDSTEIMIRNLSELLDENLLREF-SIEK-I-NIPAGQKHSFNNCCAFMV- |
3 | 4n0tA | 0.12 | 0.11 | 0.89 | 0.42 | HHpred | | NRELTTVLVKNL-PKSYNQNKVYKYFKH-CGPIIHVDVADSLFRFARIEFARYDGALAAITKTHKVVGQNEIIVSHLT---------ECTLWM--TNFPPSY-TQRNIRDLLQDIVVALSIRLPSLRNTSRRFAYID- |
4 | 3r27A | 0.08 | 0.04 | 0.55 | 0.52 | DisCoVER | | -PASPVVHIRGLI--DG-V--VEADLVEALQFGPISYVVVMPKRQALVEFEDVLGACNAVNYAQIYIAGHPAFVNYSTSQKI-------------------------------------------------------- |
5 | 1rkjA | 0.10 | 0.09 | 0.91 | 0.48 | MRFsearch | | ---FNLFIGNL--NPNKSVAELKVAISELFA-KNDLAVVDVRRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNL---SFNITEDELKEVFEDALEIRLVSQD---GKSKGIAYIEF |
6 | 2g4bA | 0.13 | 0.12 | 0.94 | 0.74 | SPARKS-K | | GSARRLYVGNI--PFGITEEAMMDFFNAQMRPGNPVLAVQINQNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPDYQPLPGAHK-----LFIGGLPNY-LNDDQVKELLTSFGPLKNLVKDSATGLSKGYAFCEY |
7 | 2g4bA | 0.12 | 0.11 | 0.94 | 0.76 | MAPalign | | --SARRLYVGNIPFG-ITEEAMMDFFNAQMTQANPVAVQINDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHD----YQPLPGAHKLFIGGLPN-YLNDDQVKELLTSFGPLKAFNLVKDTGLSKGYAFCEY |
8 | 2g4bA | 0.13 | 0.12 | 0.96 | 0.61 | CEthreader | | LGSARRLYVGNI-PFGITEEAMMDFFNAQMRNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPL----PGAHKLFIGGLPN-YLNDDQVKELLTSFGPLKAFNLVKATGLSKGYAFCEY |
9 | 2g4bA | 0.12 | 0.12 | 0.93 | 0.56 | MUSTER | | GSARRLYVG----PFGITEEAMMDFFNAQMRPGNPVLAVQINQNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGAHK----LFIGGLPNY-LNDDQVKELLTSFGPLKAFN-DSATGLSKGYAFCEY |
10 | 6y53b | 0.09 | 0.08 | 0.91 | 0.73 | HHsearch | | RPNHTIYINNM--NDKIKKEELKRSLYALFSQFGHVVIVALMRGQAFVIFKELGSSTNALRLQGFPFYGKPMRIQYAKTDSDIMRGPN--YILFLNNLPEE-TNEMMLSMLFNQFPGFKEVRL--------DIAFVEF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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