>PF14094 (212 residues) RKQRSMQLLREQGIPVIDHLPVIVGDEDAVIRTKDEIVQRAIALCLIAVYSGGIAENGNV EEEREFIEGIIEQYGAEGFFTEKERAFLYNDAPDRTDTIQMVWMYECYWVLLWALGYVET LDFPSDICDVQSAIDCLRLAENYDAFYQNATVRSKTEILDQADLIYRYDWACVDARINNR PVAGGLNDEVVLERHRALNWLVRYMDADWDDV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | RKQRSMQLLREQGIPVIDHLPVIVGDEDAVIRTKDEIVQRAIALCLIAVYSGGIAENGNVEEEREFIEGIIEQYGAEGFFTEKERAFLYNDAPDRTDTIQMVWMYECYWVLLWALGYVETLDFPSDICDVQSAIDCLRLAENYDAFYQNATVRSKTEILDQADLIYRYDWACVDARINNRPVAGGLNDEVVLERHRALNWLVRYMDADWDDV | |||||||||||||||||||
1 | 1o61A | 0.03 | 0.02 | 0.82 | 0.48 | DisCoVER | -ELKYIEEVFAPLGEFV--NRFEQSVKALALNSATAALHLALVKQDDIVLASSFTFIASVAPICYLK--AK---PVFIDCDEID-KKPKALIL-------THLY-GN-AAKMDLIEDAAEALSFYKAL---GT--FG--------EF-GVYSGGM--LIGKSNVLGAIGVAKEFLGEYFSFLDELNS--R--SNRWLMHTQGAKAYLNGNS- | |||||||||||||
2 | 2vf1A | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | ---------------------GISTTVLDLSAMMTVLAIQEAYRVLFEIRRAIAFFDLMNKAYCAQFNLMAQKINFLPKILRMAYVSS----NIFMMYAF-V--SS-GY-YRYSLVYR--D-WPVGAARLNRLFTVLRELLDAIYGDA-ANVTQSLLWQPTGIFKVTLIRNV-FSQITVADPLM----P----------N-AANYALYYS-- | |||||||||||||
3 | 3n0fA | 0.08 | 0.08 | 1.00 | 0.49 | CEthreader | LLELAILDYNMIQSVYQRDLRETSRWWRRVGLATKLHFARDRLIESFYWAVGVAFEPQYSDCRNSVAKMFSFVTIIDDIYDEIAYDNLKDKGENILPYLTKAWADLCNAFLQEAKWLYNKWKSSSGPLQLIFAYFAVVQNIKKEEIENLQKYHDIISRPSHIFRLCNDLASASAEIARGETANSCYMRTKGISEELATESVMNLIDETWKKM | |||||||||||||
4 | 3ok8A | 0.08 | 0.06 | 0.78 | 0.72 | EigenThreader | -------------------APEMDQFYRSTMAIYKSIMEQVYLGNNYLRAFHALSEAAEVYFSAIQKIGEQALQSST---SQILGEILTQRHLNSDLEVVVQTFHGDL---------------------LQHMEKNTKLD----MQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRDKNAREMKESVNRLHAQMQAFVSESKRAAELE | |||||||||||||
5 | 2ziiD2 | 0.17 | 0.08 | 0.49 | 0.25 | HHpred | -KRRVLSVLVSRNMELSYN-EYF-------PETTSFKIIRTLALICGSYGA-NVLEYEKRDKAISRAEEIMAQFSQYPFDLEKVKEEIENN-PGH------DLQLEVIAGVFEVFSRMDML------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5ohuA | 0.10 | 0.08 | 0.85 | 0.55 | MRFsearch | --EEVERFLTEHG----------------DLPQIGWLKLRWLRLLADCLYGQYQLGHGQKAEGYATSERLWLVGSQPAACDTLFGLWQGEGQLTEEKVWKRLKLAAEARNYSLASHLAQRL------PTLGNQGALMVSVAQLSQTGRFSQRHATADVVGLGLRRLARQLSLLDYYSSALPFSSDEKVAIAREIPRALPLMTQY-------- | |||||||||||||
7 | 4widA1 | 0.13 | 0.11 | 0.86 | 0.71 | FFAS-3D | --QHAVDLLEKKLTEFNLGDPLFESANDDPIKTLEEIIQEVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLITKKDDIKDRVT----YTCMKYLLMAMQGTGGPKAINNEEHAKLFFQLYDDLTDANHDGLEKEQKEVAFHVNNFTHLVTTLGMALYK--------EGHQKNDEAM---------------- | |||||||||||||
8 | 5cwqA | 0.11 | 0.09 | 0.83 | 0.64 | SPARKS-K | EARKRSEEARERG-------------------DAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARVSEEAREQ----------GDDEVLALALIAIALAVLALAEVACCRG--NSEEAESEKAQRVLEEARKSEEAREQGD--DEVLALALIAIALAVLALAEVACCRG---NKEEAERAYEDARRVEEEARKVKESAEEQG | |||||||||||||
9 | 5jmdA | 0.07 | 0.05 | 0.68 | 0.69 | CNFpred | ---------------------------------PLEVSNRLQDQTTQFQLFLPSP--SFTPDFLTEFLVNYHK----------HAVHILANYSD---GNHLLFEAQRMIYAGAFFPEFKEAPA-----WRKSGIDILNRE-VNVQVYNDGGQLDPHYHLAAINIFCKALGIADVN-----GFRNEFPQEYLDTIEKMIMFYANI-------- | |||||||||||||
10 | 3n8uA | 0.08 | 0.06 | 0.74 | 0.83 | DEthreader | ------------------TATNYNAWSYYAFCEIVDKCAEIANEVGTKIGD-PYN--LYKA----------------------------GNTEALYAVESWSRDYTNNIYSIRNAYYGSLDG-----AKAIQADACAELESIKNDLKYI-VVYVVVPTYKSLKEKNDALYNAVIVLANPAFETACDAWITAREPWEKSEFLFGPVDEGLDPN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |