Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YNESQWQNEILQIILLLYPKYIYVIEEAKIRDTYNQKTRRLDFLLIDSSGNTDIVEIKQPFDQCIVSRNTYRDNYIPVKELSGSVMQVEKYIFYLNKWGKKGEQALTEKYKKELPDEFQIKITNPSGIIIMGREHNLSLEQRQDFEVIKRKYKNVIDIITYDDLL |
1 | 5gkeA | 0.17 | 0.12 | 0.66 | 1.16 | HHpred | | GSEAEMAELIFENPEVIEPGFKPLFREKAI------GTGIVAVLGRDSDGNIVVLELKRRR-AEL-----------------HAVRQLKSYVEILREEYG----------------------DKVRGILVAPSLT---SGAKR---LLE--KEG-LEFRKLEPP- |
2 | 5gkeA2 | 0.17 | 0.11 | 0.64 | 1.22 | DisCoVER | | GSEAEMAELIFENPEVIEPGFKPLFREKAIGT------GIVAVLGRDSDGNIVVLELKRRR---AE--------L-------HAVRQLKSYVEILR------------------------EYGKVRGILVAPSL------T-SGAKRL---LEKELEFRKLEPP- |
3 | 5gkeA2 | 0.18 | 0.12 | 0.67 | 1.11 | CEthreader | | GSEAEMAELIFENPEVIEPGFKPLFREKAIGTGI------VAVLGRDSDGNIVVLELKRRR------------------AELHAVRQLKSYVEILREEYGDKV----------------------RGILVAPS---LTSGAKRLLEKEG------LEFRKLEPPK |
4 | 5gkeA | 0.17 | 0.12 | 0.67 | 2.11 | HHsearch | | GSEAEMAELIFENPEVIEPGFKPLFREKAI------GTGIVAVLGRDSDGNIVVLELKRRR-AEL-----------------HAVRQLKSYVEILREEYG----------------------DKVRGILVAPSLT---SG---AKRLLE--KEG-LEFRKLEPPK |
5 | 5gkeA2 | 0.21 | 0.13 | 0.64 | 1.10 | FFAS-3D | | -SEAEMAELIFENPEVIEPGFKPLFREKAI------GTGIVAVLGRDSDGNIVVLELKRRRAE------------------LHAVRQLKSYVEILREEYGD----------------------KVRGILVA---PSLTSGAKRLLE------KEGLEFRKLE--- |
6 | 2vldA | 0.18 | 0.12 | 0.63 | 1.04 | HHpred | | -SEA-EANLIFENPRVIEEGFKPIYREKPI------RHGIVDV-GVDKDGNIVVLELKRRK-ADL-----------------HAVSQ-KRYVDSLKEEY----------------------GENVRGILVAPSLT---EGAKKLLE-----KEG-LEFRKLEP-- |
7 | 2vldA2 | 0.17 | 0.11 | 0.64 | 1.92 | HHsearch | | --SEAEANLIFENPRVIEEGFKPIYREKPI-----R-HGIVDV-GVDKDGNIVVLELKRRK-ADL-----------------HAVSQ-KRYVDSLKEEY----------------------GENVRGILVAPSL---TEGAKKLLE-----KEG-LEFRKLEPP- |
8 | 6hz4M | 0.15 | 0.11 | 0.73 | 1.00 | DEthreader | | EMSLLYQKFLYEFCRRELTSAN-TTR-SYLKWDASLLRMETDITIRS-SEKILIVDAKYY-KSIFSRE--------KF-HS-QNLYQLMNYLWSL---KP--E-----------------NGENIGGLLIYPHVDTA----V--KH--RYKIGFDIGLCTVNELL |
9 | 1xmxA | 0.12 | 0.08 | 0.70 | 1.00 | DEthreader | | ANGEWLETLVHSTVKQIQMPIQDRSLNVQVYRQLREVRNELDVATVV-NNKLHIIECKTK--G-M------------RDG-DDTLYKLESLRDLLG-------------------------GLQARAMLVSFRP--L---RH-NDITRAEDLG--LALIGPDELL |
10 | 5gkeA2 | 0.18 | 0.12 | 0.67 | 1.02 | HHpred | | GSEAEMAELIFENPEVIEPGFKPLFREKAI------GTGIVAVLGRDSDGNIVVLELKRRR-AE-----------------LHAVRQLKSYVEILREEYG----------------------DKVRGILVAPSL---TSGAKRLLE-----KEG-LEFRKLEPPK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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