Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | AILSALKNLQEKIRKLELERTQAEDNLRRLSQETSEYKKVLDKEIRQKDSSKTEVARQNRELSTQLAAAESRCTLLEKQLEYMRKMVKNAESERTTVLQKQASIGRERSLDHLELQTKLEKLDMLEQEYLKLTATQNIAQNKICLLEQKLREEEHQRKLVQDKAAQLQTGLETNRILL |
1 | 2dfsA | 0.05 | 0.04 | 0.91 | 1.17 | DEthreader | | --R----E--KE---RWTYQEFFSRYRVLMKRDKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMA--RE--K- |
2 | 2d4cB | 0.10 | 0.10 | 0.97 | 1.33 | DEthreader | | EGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPQAEALLAEGEELEVDSLDIEVKQFIDPLQNLHKDLREIQSALQHHLKKLEGRRLDFDYKKKRQG----K--IPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQ |
3 | 4e40A1 | 0.13 | 0.12 | 0.90 | 1.00 | SPARKS-K | | ASGILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKT-----NETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDAT--TFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV----------- |
4 | 5xg2A | 0.12 | 0.12 | 1.00 | 1.00 | MAPalign | | GAIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEIFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKR |
5 | 2tmaA1 | 0.12 | 0.11 | 0.87 | 1.43 | FFAS-3D | | -----MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELV----SLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVE--------------EELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHI- |
6 | 4cpcA | 0.06 | 0.04 | 0.80 | 1.00 | DEthreader | | I--NKALLAKRKRLEMYTKASLKTSNQKIEHVWKTQQDQRQKLNQEYSQQFLTLFQQWDLDMQKAEEQEEKILNMFRQQQKILQQSRIVQSQRLKTIKQLYEQFIKSMEELEKNHDNLLTGAQNEFKKEMAMLQKKIMMETQQQE--------------------------------- |
7 | 5ebzA3 | 0.09 | 0.09 | 0.98 | 1.33 | DEthreader | | GQRAAMLSLLRYNANLTKMKNTLISASQQLKAKLEFFHKSIQLDLERYWKMEEKAIHYA--EVGVIGYLEDQIMSLHAEIMELQKS--PYGRRQGDLMESLERAVKIIVHTVQSQDRVLKELFGHLSKLLGCKQKIIDLLPKVEVALSNIKEADNTVMFMQGKRQKEIWHLLKIACTQ |
8 | 7dl2D | 0.19 | 0.19 | 0.97 | 1.39 | FFAS-3D | | -WKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIAELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMLNRQLLVLGEVNELYLEQLQNKKELEKNRSHVLQQTQRLDTSQKRILELESHLAKKDHQKKYLEDVKLQARGQLQA----- |
9 | 6u0tA | 0.16 | 0.11 | 0.66 | 1.00 | DEthreader | | ------------------C--AKE-EGE-DLA-YDARIKYQKETQKQWIEQQIREKKMREEAERNEERAYATQTLELNRMRGMLEDDFNRKKASIRQAVKEENQQLDKQKRDLEKQSNNEKLNYERTEIDMVKT-RG--Q-K--RP-------------------------------- |
10 | 4hpqC | 0.10 | 0.10 | 0.98 | 1.33 | DEthreader | | LLREGGRNLEEEWQTVVRLVNDMKFWQNEITKMMNKLDNITNEIDQQHNKLGDFI--SRDSSH-ILDSKLNEIPTIRKQVENITRQYQTMLAKVQSQLESRMKGLREMTLKLLTELRKHEEYISVFEGISALIQKFKASCLEDIRQTRNLLDFYANFERSYHNLLKEVKRRKETAAKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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