Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LALVPARRSADIPAAIGWTGPLNHENDVARLCAVLRTWEDRFGARVVAIGFATLAVSVAAPPATQEEAEAIAAEHYAFCPDNIEQGSGTIEAYAKDLIGAPSWHFWWD |
1 | 5kcgA | 0.08 | 0.07 | 0.92 | 1.00 | DEthreader | | CFSTIGTPLFDTFAAIEMYDAPL-RTALSSLKDFLRPRVP-PPLTGLIGVSRLKVYLATFRM-DLSLIRDYWTLGGLL-D-GT----KGLEMVETLAKLPFGINYAMK |
2 | 4ld7A | 0.06 | 0.06 | 0.92 | 1.00 | DEthreader | | DQFKSGIPVQDVAFNAIEAPKQIESPLR-VLRTFVTKLFKTVTSDVFILAVIKLYVADSQL-S-LATLREFWTLGGSV-D--AT---KGLEIAEELWRYPLVVNYELS |
3 | 2ctlA | 0.12 | 0.06 | 0.45 | 0.68 | DisCoVER | | -----------------QEDRAL----------------------------RSFKLSV--TVD-PKYHPKIIGIRLEHD-VNI---------QFPDPQDQITITGYE- |
4 | 4ld7A | 0.03 | 0.03 | 0.94 | 1.00 | DEthreader | | YFFLKSIPVQDVAFNAIEAPKQIESP-LRVLRTFVTKLFKVTSDVFILAVSRIKLYVADSQ-LSLATLREFWTLGGSVTD-ATM---KGLEIAEELWYLPLVVNYELS |
5 | 5yh1A2 | 0.09 | 0.08 | 0.91 | 0.74 | CEthreader | | SVVLPNGIRFNTIDVELYAPKFEYPSPGKLSGIIHDHFKEQYPILTLAYGPDFAVVRASDGAKYNFDLNKIVKILAEKLPDAGVEGGGH----------SYAGSIKFF |
6 | 1qxoA | 0.11 | 0.10 | 0.95 | 0.72 | EigenThreader | | RYLTAGESDLRRRQGGYGRGGRKIENDARETTAVGAVAKRLLAIANHVVFGTIVETVVGVPVGLK--LDARLAQAVVSINAFRR-TNNLG--GFEGGTNGQPIVVPIP |
7 | 3bofA | 0.10 | 0.09 | 0.92 | 0.37 | HHpred | | ---LTGTDPANFAITFDELLGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVETVYPLKPHDFAVHIDSYYELGVNIFGGCCGTTPEFRKVLGNRKP------ |
8 | 1gc5A1 | 0.10 | 0.08 | 0.81 | 0.45 | MRFsearch | | ---------VELASIMEIIGDEELAKHIFSVIDAMNVLMDETGIERIHFHTYGYYLALTQY-RGEEVRDALLFASLAAAAKAMKGNLERIEQIRDAL----------- |
9 | 5yh1A2 | 0.14 | 0.12 | 0.85 | 0.45 | FFAS-3D | | FNTIDVEL---------YAPKFEYPSPGKLSGIIHDHFKEQYGILTLAYGPDFAVVRASDGAKYNFDLNKIVKILAEKLPDAGVEGGGHLEAFAKEVLKLK------- |
10 | 1ua4A | 0.06 | 0.06 | 0.95 | 0.64 | SPARKS-K | | SVGLN---EVELASIMEILLLAHDPVDPIAVTEAMLKLAKKTGVKRIHFHTYGYYLALTEY--KGEHVRDALLFAALAAAAKAMKGNITSLEEIREATSVPVNEKATQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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