Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SSNFETTIQAYLENRAKTDSLFAETYRKANKSIEECIKYIYSKARKLAKGGNAVGVDDATVYGWAVHYYDEDDIKVKDVKERVEVVAPTTVQEPVVQEPVKEEKPEPVKQKSARKKTKQELQKIFDSRQLSLFDM |
1 | 1mp1A | 0.04 | 0.02 | 0.56 | 0.70 | DisCoVER | | ---------------------S--H----MQ---LK-FAECLEKK--VD-MSKVNLVIWITKDSKMMQINLTGGKARFMGELW-PLLLSAQ----------------------ENIAGIPSAFLELKKEEIKQ-- |
2 | 3pw3A | 0.07 | 0.06 | 0.79 | 0.83 | DEthreader | | RAGT-CWCYSSYSFLES-ELL-GK-EYDL--SE-FTVYNTYLDRADAAVRHGDVSFSQGGSFYDALYGETFGLVE----HELSATD-V-----------YTHHP-FYTYNFVFIIYVK--NSWGW-FVKTN-IVV |
3 | 6xttB | 0.09 | 0.05 | 0.57 | 0.61 | CEthreader | | LNSMTPLLPDLICKGFIQDPDLKKRFDEIKMTIPESTKKCQDELYASKINSETAGTWGRSLGECIGKDFAEKHLIPK---------------------------------------------------------- |
4 | 5vblB | 0.08 | 0.07 | 0.99 | 0.70 | EigenThreader | | FIASLAVADLTFVVWATYTYRLSSYLIFVNMYASAFCLTGLSFDRYLAIVRPVGAVATAVLWVLAALLAVGFVVPFTIMLTCYFTCTVCGY--IYNPEDGDPDNGVNPGTVCPLCGVGTLYMLGSLLHWIFPYCT |
5 | 6bq1A | 0.09 | 0.07 | 0.74 | 0.36 | HHpred | | ---KMGYVREYILWAASKSQLLAHQFIDEEGHIGDLLDQLVEEITGSLS-G-----PAKDFYQREFDFFNKITNVSAIIKP----Y----P-KGDERKKACLSALSE--VKVQPGCYLPS--------------- |
6 | 6qbiA | 0.13 | 0.08 | 0.61 | 0.48 | MRFsearch | | -SEDQKTHLDWLKEALGNDGEFDKFLGYDESKIKTALDHIKSELDKCNG--NDADQQKTTFKQTVQGALSGGGFGSNNAVTTCGNG------------------------------------------------- |
7 | 3pfiA2 | 0.11 | 0.06 | 0.53 | 0.49 | FFAS-3D | | ----DSELALILQKAALKEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRA-NEALNSLGVNELGFD---------------------------------------------------------- |
8 | 5cwmA1 | 0.13 | 0.10 | 0.74 | 0.68 | SPARKS-K | | ---DPEDELKRVEKLVKEAEELLRQAKEKGSTAEEAAREAKKVLEQAEKEGDVAAVEVVRVAELLLRIAKESGSE----------------EALERALRVAEEAARLAKRVLELAEKQG---------------- |
9 | 3gjxA | 0.15 | 0.07 | 0.45 | 0.46 | CNFpred | | EQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLV----------SEVEETEIFKICLEYWNH---------------------------------------------------------------- |
10 | 2ycuA | 0.04 | 0.03 | 0.79 | 0.83 | DEthreader | | SFCVVIILCKT-GKFINIET--YL-IINYTEKLQQLFNHTMVLEQEEYQIPW------TNPSF----------------E--RICGPNGQSKIFFRAGVLAQLEEERASQTKSDYLKRANELVQWINDKQALEGQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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