>PF14054 (295 residues) LFLISLTMMFSCTKTVEFKGEVTEPMLVVNSIINPDSAFKVHVTKSRFFLDDAPISNVES ANVRILKDDALIAELSHTVDGIYTVADITPEAGQKYQIEVSAPGYDDTRAEAMIPTTVAI ASLDTATVTHEEYWDEMFEIGVKINDPANTENFYRVSAYLDSYIFDEQTGDYWHYRDYIW LSSEDPVITGGENSGDIFDVGYYNEFRIFNDSYFEGQSYTVKFMSDRWQLSTEHPESFFL IHVYLESLSEEYFTYLRSRAMHNNNEDNPFVEPVPVYSNIENGIGFFGGYASSHY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LFLISLTMMFSCTKTVEFKGEVTEPMLVVNSIINPDSAFKVHVTKSRFFLDDAPISNVESANVRILKDDALIAELSHTVDGIYTVADITPEAGQKYQIEVSAPGYDDTRAEAMIPTTVAIASLDTATVTHEEYWDEMFEIGVKINDPANTENFYRVSAYLDSYIFDEQTGDYWHYRDYIWLSSEDPVITGGENSGDIFDVGYYNEFRIFNDSYFEGQSYTVKFMSDRWQLSTEHPESFFLIHVYLESLSEEYFTYLRSRAMHNNNEDNPFVEPVPVYSNIENGIGFFGGYASSHY | |||||||||||||||||||
1 | 2i07A | 0.09 | 0.07 | 0.80 | 1.29 | CNFpred | MYSIITPNILRLE---------SEETMVLEAHDAQ-GDVPVTVTVHDF---PGKKLVLSSEKTVLTPATNHMGNV------TFTIP-----RNKFVTVQATFG-TQVVEKVVLVS--LQSGYLFIQTDKTIYTPGSTVLYRIFTVNHLPVGRTVMVNIENPE--------GIPVKQDSLSSQNQLGVLPLSWDIPELVNMG--QWKIRAYYENSPQQVFSTEFEVKE--------YVLPSFEVIVEPT-EKFYYIYN-------------EKGLEVTITARFVEGTAFVIFGIQD | |||||||||||||
2 | 3afgA2 | 0.11 | 0.04 | 0.34 | 0.55 | DisCoVER | ------------------------------------------------------------------------------------------------------------------A-KLTF----TGY----VSNKGSQSHQFTISG----AGFVTATLYWDNS----------GSDLDLYLYDPGNQVDYS-----YTAYYG-FEKVGYYN--PT--AGTWTIKVVSYSGS-------ANYQVDVVSDG---------------------------------------SLGQ--- | |||||||||||||
3 | 2pn5A | 0.05 | 0.03 | 0.67 | 0.83 | DEthreader | -PESLVQPRLGVPT-NVKFV-NILVLDY-----------------ATLLQGYMQTAENY-----FIDADKNERFALLSFVMAKDGIPV------NQRYGLTAEQIDGLE-V-----ENRFQLDLEKQNTGSD-YELRLKVCASYIPQLTDRSNMALIEVTLP-S--------GYVVDPISEQTKVNPIQKT-E--IRYGGTSVVLYYDNM---G---SERNCFTLTAY-RRFKVALKRPAYVVVYDYYN---------------------------------------TNLNAIK | |||||||||||||
4 | 4plnC1 | 0.08 | 0.03 | 0.34 | 0.36 | CEthreader | ----------------GSDETRVPEVPSSLHVRPLVTSIVVSWTPPENQN-----IVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIE-NLDPSSHYVITLKAFNGIPLYESAVTRPHTVPDP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 2geeA | 0.14 | 0.08 | 0.59 | 1.00 | EigenThreader | -----------------PRGSHMEVPQPLSFVDITDSSIGLRWTPLN-------SSTIIGYRITVVAAGPIFEDFVDSSVGYYTVTG--LEPGIDYDISVYTGESTPTTLTQQTAVPPPTDLRFTNIGP-------DTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV-------------------------------------AELSISP-----SDNAVVLTNLL---------PGTEYVVSVSSVYE-------------------------------------QHESTPLR | |||||||||||||
6 | 6cd2C | 0.08 | 0.04 | 0.48 | 0.35 | HHpred | ------------RFYLFRAIPRWRANLTLGENNINSWSYTASLE-SMLPPRLRGYAAETNARVVVSQQGRVLYDS-MVPAGPFSIQDLDSSVRGRLDVEVIEQNGRKKTFQVSVPYLTRPGQVRYKLVSGGPGLSNQWSLYGGAVLA---GDYNALAAGA--------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6fwvA | 0.10 | 0.07 | 0.68 | 0.58 | MRFsearch | -------------------------KISTDLVVNWESVGSLKIKLGE------KKEVLKGAVFEVSNENFKQNVTTS-DKGIAELGNL---PIGIYSVKEIQADRSVKKIEVKT---GETAVLELKNEN------VKGELEITKVDVADPNAEFTIYNEVVKGKTDEKGVAKFKLPGKYTYKETI-------------GYVINEETFAFEIKE-NGEIIKHIVQDK-----------KVEGELEITKVDVAD-------------------------GNTKLPNAEFTIYNEQG- | |||||||||||||
8 | 6cd2C | 0.10 | 0.08 | 0.79 | 0.59 | FFAS-3D | ------------------AIPRWRANLTLGENNINSDIFRASLESMLPPRLRGYAPQITNARVVVSQQGRVLYD-SMVPAGPFSIQDLDSSVRGRLDVEVIEQNGRKKTFQVDTASVPYLTRFATGEASWGLSNQWSLYGGAVLAGDY-------NALAAGAGWDLGVPGTLSADITQSVARIEGE-------------------------RTFQGKSWRLSYSKRFDD-----------ITFAGYRFSERNYMTMEQYLNARYRNDYSSREKEMYTVTLNKNTSFNLQYSRQTY | |||||||||||||
9 | 4b5zA | 0.11 | 0.10 | 0.88 | 0.82 | SPARKS-K | TVEIGSIEGHNNTNKVEPHAGQR---AVLKYKLKQGDYFDFTLSNNVNTHGVSTARKVPE----IKNGSVVMATGEVLEGGKIRYTDVTAETNGNQTITSTLNE-EQTSKELDVYKDGIANLNGSIETFNKANNRFSHVAFIKPN--NGKTTSVTVTGTLMKGSNQNGNQPKVRIFEYLGNNEDIAKVYANTTDTSKFKEVTLQNNGSYSLNIENDKTYVVHYDGEYLN---GTDEVDFRTQMVGHPEQLYKYYYDRGYTLTWDNGLVLYSN----------------------- | |||||||||||||
10 | 5f7uA | 0.10 | 0.08 | 0.81 | 1.28 | CNFpred | DSITLNMTATA---------GDFSPKLYLSFEDL--DTLRMELSPTGKETGHAGK-----SGYTVEDTAEKVTVTTE--DLSIEIQK------SPYRMEVHQADGTLLTSEYT-----TANSLGWLTDG----KNVINQYQNNFMTP-SDEAFYGFGERYDTINQR--GKDVETYVYNEYQDQTERTYLAVPFFVSKYGMYVNSFHSQFQMASKVEDKYSFVLDNDGD--------MTNMLDYYVISG-KDQNDIVNNYTDIT-------GKTTLLP---KWAFGLWMSANEWDR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |