Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | KDVPETSQEATLQSSSKKCKMVTKRTRNQKSYKMSEREKGTNTVEVITSAQEAMLAAWARIAARAVQPKTVNSCFIPTSAENFL |
1 | 1vdjA | 0.14 | 0.02 | 0.17 | 0.68 | DisCoVER | | KQVK---------------------------------------------------------------------EKDLRDVGDW- |
2 | 5frpA2 | 0.05 | 0.05 | 0.88 | 0.83 | DEthreader | | FEF--NARQIKISFAIKYYTLQWASGLDSTKADAEKQFNDERILLACTNDIP-FLTFKNCYN-ELVSQRIAKVQIFRI------ |
3 | 5cw3B | 0.08 | 0.08 | 1.00 | 0.61 | CEthreader | | NVRSVGNQMGFLLGEALEFIVKETVKIHINVEAIVVRDKSKQVIGWFCFKDKLLHKQFASHFSGVCKEDFFLTCLLNASTSETS |
4 | 4x90A2 | 0.10 | 0.10 | 0.98 | 0.55 | EigenThreader | | PWGGVA--KTLRVLASGDNIGPLKIREQQRSARDYRKFFQDIGCLYGTGVPGDGTKSALQCQAWQSRQHQVLLQELSEHIEMLA |
5 | 6k6wA1 | 0.12 | 0.11 | 0.88 | 0.25 | HHpred | | --------FVRIQQVLRKV-SFLGRSDIPKDLPINENYPKNEVIIIATGMQGEPVEALSQMARKKHKIMNIEITASANMEVII- |
6 | 2pffB | 0.19 | 0.06 | 0.31 | 0.68 | MRFsearch | | ---------------------------------------GTGVRVIVAGTLYKTSKAAQDVWNRA------------------- |
7 | 3r7wB1 | 0.15 | 0.10 | 0.63 | 0.32 | FFAS-3D | | -DGLSEDFKVDAQRDIQRTGEELLELGL----------DGVQVSFYLTSIFDSIYEAFSRIVQK-------------------- |
8 | 4wx8A | 0.10 | 0.08 | 0.87 | 0.79 | SPARKS-K | | LKIPETERQATIATKVLSP----DPILKPQDFQVDYSSEKNVLVQFRSIDDRVLRVGVSSIIDSIKTIVEADVLSHH------- |
9 | 1k9eA | 0.08 | 0.02 | 0.29 | 0.44 | CNFpred | | ------------------------------------------RIYIIGKTDAGVLYGVFHFLRLLQ------------------ |
10 | 5oqlE | 0.07 | 0.06 | 0.86 | 0.83 | DEthreader | | ------------VADKFYGIEVLPALHPMCTRPFWGPAMFCTVHQPLVAFPKALRESLARLKAALQSTDRLKMWMGILIEKLDA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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