>PF14025 (187 residues) SIPTGQILVRDPLYYLGNRQEQPYFQTVPAGTYRTEVCVVKPDEEDCARYAAVRVKFADA PAVRFEEALIGHEDLTDLGEGEFFGFNVDAGLACICDKQLHHAFCDFKEKWHKEHPGENL YDHYFAALFAESFRQNPQYQREGGDWLNWQIPGTEYHLPIFQSGFGDGAYPVYWGYDETG AICQIVV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | SIPTGQILVRDPLYYLGNRQEQPYFQTVPAGTYRTEVCVVKPDEEDCARYAAVRVKFADAPAVRFEEALIGHEDLTDLGEGEFFGFNVDAGLACICDKQLHHAFCDFKEKWHKEHPGENLYDHYFAALFAESFRQNPQYQREGGDWLNWQIPGTEYHLPIFQSGFGDGAYPVYWGYDETGAICQIVV | |||||||||||||||||||
1 | 3nkgA | 0.03 | 0.02 | 0.61 | 0.64 | DisCoVER | ------------AP--------------------------------------NPISIP-IDLSQAGSVV-------------EKEVKIESYHLILQFAVWKFLGFNSYRLAKSIDETYDCDGTVV--PI--KI--TIHQILIADNLYTKGN-GSAYTRDITTILDKGYIFRIENIEAFRKVDFTIY- | |||||||||||||
2 | 6kz8A2 | 0.09 | 0.06 | 0.75 | 0.67 | DEthreader | -AFPGVPY---------------TFFSQRQGCKVLVGGIDCDGFHQPEWHDIHSRLEGPIAWMYNQRSIAGLVSGKDNI----IDR-I----QDAYIHAIRRAKELKISKIEKGVIDPRNYLT--F--FC--LGNRRFMI--YVHTMMIVDD--EYIIIGSANINQRSRDSEIAM------------ | |||||||||||||
3 | 1x7nA | 0.10 | 0.09 | 0.84 | 0.61 | CEthreader | GAKKSVRRLSDMEGYFVDERAWKELVEKEDPVVYEVYAVEQEEKEGDLNFATTVLYPGKVGKEFFFTKGHFHAKLD------------RAEVYVALKGKGGM-----------------LLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPADAGHDFSKIVIEENGEVKVVDN | |||||||||||||
4 | 4mqdA | 0.10 | 0.05 | 0.52 | 0.57 | EigenThreader | KISYHQFTVFQKDSTPPVDWTGAISFEANTKAFILFRLN-----------SSE----TVNSYEKKVTV----------------PFHVTENGIHIESI---------------------------------------------------------SKRLSFD--LPKGDYQLTCWTVPAESDTYIID | |||||||||||||
5 | 4mqdA | 0.14 | 0.04 | 0.27 | 0.29 | HHpred | HVTENGIHIESI--------SKRLSFDLPKGDYQLTCWTVPAES--------------DLHADTYIIDAVSV------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6rreB | 0.12 | 0.08 | 0.65 | 0.53 | MRFsearch | -----------------------------------------------SEIFASSLFVHHKIVIGYTKD------------GMAFQIVVDGFYGCERQ-AVFSFIDNYVLPLIDNFDSKKVTESLIHTIYSLRSKH-----APLAEFTMSLCVTYQKDEQLFCAGFGIGDTGIAIKRN-EGTIEQLVC | |||||||||||||
7 | 3or8A | 0.10 | 0.08 | 0.80 | 0.46 | FFAS-3D | ----------HPYYPFNGKQAEDYLRSKERGDFVIR------QSSRGDDHLAITWKLDKDLFQHVDIQELEKENPLALGK----VLVVEG--QRYHDLDQLQNKIRLLNELTSNEKFKAGTKKEVVKFIEDYSKVN----------------PKKSVYYFSLNYENPGWFYLIFKLNAESKLYIWNV | |||||||||||||
8 | 6rreB | 0.12 | 0.10 | 0.82 | 0.69 | SPARKS-K | ---MRSIITQICNGVLHGQSYQSGSNDLDKGNSEIFASSLFVHHKDSDDKIVIGYT----------------------KDGMAFQIVVDGFVFSFIDNYVLPLIDNFSLDLTRYPDSKKVTESLIHTIYSLRSKHAP----LAEFTMSLCVKDEQLFCAGFGIG----DTGIAIKR-NEGTIEQLVC | |||||||||||||
9 | 6b67A | 0.12 | 0.09 | 0.75 | 0.77 | CNFpred | --------------------------------PKMEKHNAQGQG-NGLRYGLSSMQGWRVMEDAHTAVIGL---PSGLE--SWSFFAVYDGHAGSVAKYCCEHLLDHITNNQDFKGSVENVKNGIRTGFLEIDEHMRVM-RSGSTAVGVLIS--PQHTYFINCGE----SRGLLCRN--RKVHFFTQ | |||||||||||||
10 | 1j36A | 0.12 | 0.09 | 0.78 | 0.67 | DEthreader | ------------IEEVISKSRDH------------------FEQQLEDIFIRLYQQI-------GYRFLRKHYGDAVVSETGPIPMHNWAQQWSIASPPLV-DVSAEMEKQ-AYTPETRTQDQLFTVHHELGHYGNPGFHEAVGDVSLSTPLLLYRQLTDKFLFAMFRDSGILEENI--KNNVHIG- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |