Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | FRFQKRIKIAPGVRLNISKSGVSTSVGLRGASVTVGKRGVRTNVGIPGTGISYS |
1 | 4rlcA | 0.11 | 0.11 | 1.00 | 1.17 | DEthreader | | EAGSIGYFLTDDVELALSYTSLDAIYHFGRPYVSAGLANIGAGLKYYFFFAKAS |
2 | 2wjqA | 0.09 | 0.09 | 1.00 | 1.17 | DEthreader | | MEVNYAIKLDDQWTVRPGMPYVKLSWDATDLNFGIRYWDGYVTYHINSDFTFAQ |
3 | 3riqA2 | 0.09 | 0.07 | 0.81 | 0.75 | DisCoVER | | --------NAMTLSMRP-TINPSLVLTSIVKLSAIQGARVGELQLNLGFKHMS- |
4 | 4fuvA | 0.11 | 0.11 | 0.98 | 1.17 | DEthreader | | AEGALLWQANPYVGLALGYVYLNAEIRWAGLYVAAGAPYLGFGFAPKIGV-FGE |
5 | 5lhxA | 0.17 | 0.17 | 1.00 | 0.61 | CEthreader | | NIPIKRINVPEIGIATELSHGVVQVQFYDGSVVSVIPSMGGITYTQPNGTSTHF |
6 | 5onuA | 0.02 | 0.02 | 1.00 | 0.72 | EigenThreader | | AADGYSLSAGFNAGYADQDDQNEYMLAFAGLFTDGKDVDYTGYELAGQAATYNN |
7 | 4lp7A1 | 0.19 | 0.13 | 0.67 | 0.23 | HHpred | | ---YAASQNGPILKVNASAQGAAMSVLPKKFEVNATVAL--------------- |
8 | 3wiqA2 | 0.09 | 0.07 | 0.83 | 0.47 | MRFsearch | | ---DDVLSVNESLKFSIWWNLLDFKITKDNVEVKKRVEKGNVKLKIKG------ |
9 | 2wdaA4 | 0.04 | 0.04 | 0.83 | 0.24 | FFAS-3D | | ---------GEALEIVWDHPVGAVLRADETVEILATGRRLHLRVTPGVVCTTHE |
10 | 5z1vA | 0.22 | 0.19 | 0.85 | 0.86 | SPARKS-K | | --------HHSATQVTILKKGITWVEVPKGESREFNIRGKYFTVSVSGTPSISG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|