Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGRRFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLNENRNLQASEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKE |
1 | 2dhzA | 0.11 | 0.06 | 0.54 | 0.65 | DisCoVER | | ---------------DEIFCRVYMPDHSYVTSRLSASVQDILGREDSLILVAVS-S-SGEKVLLQPTEDCVFTNSHLFACTRDSY----EA--LV-PL--P------------EEIVSPG----------------------------DTEISGPSS----------- |
2 | 3a1iA2 | 0.09 | 0.07 | 0.73 | 0.67 | DEthreader | | VAIKDNMNSRTVEG---------ATV----LCFSGGSSAAIPAAFVVGHKPTFG-LVP--------------IEIDHLGPTVHDALSVAGRDG-NDPRQA----------HAIWIATDGGAYQMLDGNGYG-----MNA-GI-GGASYGARVARYVLVMPTLMIAAPF |
3 | 2dhzA | 0.11 | 0.07 | 0.59 | 0.80 | CEthreader | | --------GSSGSSGDEIFCRVYMPDHSYVTIRSRASVQDILGSVDSLILVA---VSSSGEKVLLQPTEDCVFTALLFACTRDSYEALVPLPEEIQVSPGDTEISGPSSG---------------------------------------------------------- |
4 | 1l0wA | 0.09 | 0.08 | 0.89 | 0.62 | EigenThreader | | RDFLVPYRHEPGLMVAGLDRYFQRDEDLREMSFVEKEVGPLFREAESVKALALPVAKRHKAQGLA------RPGDTLLFVARKVAATALGAVRLRAADLL-------GLKREGFRFLW-----VVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVRALA |
5 | 1qf6A | 0.12 | 0.11 | 0.87 | 0.35 | HHpred | | -------------------PVITLPDGSQRHYDHAVSPMDVALDGPACIAGRVNGIENDAQLSIITAKDKMAIGPFYYDVDLD---RTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGEDAHDKPEEYVDMCRGPHFKLMKYWRGDSNNKMLQRIYG |
6 | 1nyqB | 0.12 | 0.06 | 0.51 | 0.62 | MRFsearch | | ------------------QINIQFPDGNKKAFDKGTTTEDIAQSIKKAVAGKFNGQLV-DLTKPLETDGSIEIGGFYYDFDID---QNISSDDFEQIEKTMKQIVNE------------------------------------------------------------- |
7 | 1qf6A1 | 0.12 | 0.07 | 0.59 | 0.40 | FFAS-3D | | --------------------VITLPDGSQRHYDHAVSPMDVALDIGACIAGRVNGELVDAC-DLIENDAQLSDNGFYYDVDLD---RTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARE--------------------------------------------- |
8 | 6srtA | 0.08 | 0.07 | 0.80 | 0.60 | SPARKS-K | | VEVNYTWATPLSYNFNPNMIVYHHTVDN----NMTPKIDEIHKQIGYHFYIRKDRGRPENAVGSHAPGVN--ARAFGIASEGNFNEEYVTPQQMTSLIALSRYLMNKYN-----ITDLKRHKDVRQTECPGNNFPFEEIKAKLNVK---------------------- |
9 | 1tjeA | 0.13 | 0.05 | 0.42 | 0.58 | CNFpred | | --------------------------AQLSIITADEEGLEIIRHSCAHLLGHAIKQL---HTKMAI--GPVIDNGFYYDVDLD---RTLTQEDVEALEKRMHELA--------------------------------------------------------------- |
10 | 1r2jA | 0.09 | 0.07 | 0.80 | 0.83 | DEthreader | | AAGGLLNFTVGLCSSLRSVTSMAWVQRL-TLATAYADH-----------LVVFG-LQEDSAVVVVPADTRVGHADL-----AGAVLAGSGAS-LPMLVAASLAYGRKSVACVLRCRTAAVAHARTREQGRP-----DHQLVAGH--IADLWTAEQIARCE-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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